Bioinformatics Lab @ Wilmer Institute, Johns Hopkins University

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SRF has 215 co-regulatory transcription factors (TFs)

Summary Table (Download Table)

Co-regulatory TF Tissue -log(P)
POU3F2 uterus 7.67881
CDP_CR3+HD testis 7.30741
LHX3 stomach 7.23197
GCNF stomach 7.67224
CART-1 stomach 6.21877
TFIIA soft_tissue 6.79976
TBP soft_tissue 6.19841
TAX/CREB soft_tissue 7.18248
SP1 soft_tissue 16.9948
RSRFC4 soft_tissue 9.16871
PAX-3 soft_tissue 6.42872
NF-KAPPAB_(P65) soft_tissue 6.93176
MEF-2 soft_tissue 9.66168
MAZR soft_tissue 10.264
LUN-1 soft_tissue 6.61047
GATA-4 soft_tissue 9.71006
EGR-1 soft_tissue 8.62388
CREB soft_tissue 10.0546
ZID small_intestine 7.20726
WHN small_intestine 7.28531
USF small_intestine 9.35976
TITF1 small_intestine 6.36596
RB/E2F-1/DP-1 small_intestine 11.9255
PEA3 small_intestine 7.74605
NKX6-2 small_intestine 6.21712
NF-AT small_intestine 8.60894
LUN-1 small_intestine 10.0542
LHX3 small_intestine 6.34799
HNF-1 small_intestine 10.5223
HMG_IY small_intestine 8.05183
GCNF small_intestine 7.73213
GATA-4 small_intestine 6.2396
ELK-1 small_intestine 11.6704
ELF-1 small_intestine 7.4698
E2F-4/DP-1 small_intestine 10.7557
E2F small_intestine 18.79
AP-2 small_intestine 6.31309
AP-1 small_intestine 6.29627
PBX-1 skin 6.19359
HNF-1 skin 6.271
TFIIA prostate 6.54199
TFII-I prostate 6.69261
OCT-1 prostate 7.23276
HEB prostate 8.45194
FREAC-4 prostate 8.75453
C/EBPALPHA prostate 7.94899
AP-4 prostate 6.96416
SP1 peripheral_nervous_system 8.22054
RSRFC4 peripheral_nervous_system 14.8561
PAX-3 peripheral_nervous_system 6.96095
NRL peripheral_nervous_system 6.41224
MEF-2 peripheral_nervous_system 9.96629
MAZR peripheral_nervous_system 9.3056
IRF-7 peripheral_nervous_system 7.4338
IPF1 peripheral_nervous_system 9.49702
FREAC-2 peripheral_nervous_system 6.78121
CREB peripheral_nervous_system 8.66
C/EBPBETA peripheral_nervous_system 6.45924
BACH2 peripheral_nervous_system 7.56494
POU3F2 pancreas 6.59327
OCT-1 pancreas 8.73558
GR pancreas 6.27337
FOXJ2 pancreas 7.32637
FAC1 pancreas 7.4837
ZID muscle 10.8825
USF muscle 6.83697
TST-1 muscle 15.3313
TEF-1 muscle 12.4996
TEF muscle 7.8435
TAX/CREB muscle 9.45992
TATA muscle 29.8598
TAL-1BETA/ITF-2 muscle 7.2139
SRF muscle 12.9346
SREBP-1 muscle 7.2686
SMAD-3 muscle 10.0989
RSRFC4 muscle 23.7435
RREB-1 muscle 14.6692
PU.1 muscle 6.87366
PITX2 muscle 7.54654
NR2E3 muscle 10.5245
NF-KAPPAB_(P50) muscle 8.13258
NF-KAPPAB muscle 8.45874
NERF1A muscle 6.47593
MRF-2 muscle 8.77958
MIF-1 muscle 12.3709
MEF-2 muscle 30.8206
MAZR muscle 10.285
LUN-1 muscle 9.43907
LMO2_COMPLEX muscle 6.23754
IRF1 muscle 6.19996
HSF1 muscle 7.04085
HNF-4ALPHA muscle 6.82433
GATA-3 muscle 7.67081
FOXD3 muscle 7.7301
ER muscle 7.13334
E47 muscle 13.4507
COUP-TF/HNF-4 muscle 11.1122
CDP_CR3+HD muscle 7.64551
CDP_CR3 muscle 6.26818
CDC5 muscle 6.66624
C-MYC/MAX muscle 10.3504
BRN-2 muscle 6.22437
BACH1 muscle 10.68
ARP-1 muscle 11.3155
AP-1 muscle 8.00094
AMEF-2 muscle 18.1996
STAT6 lung 6.77474
MTF-1 lung 7.1327
HNF-3ALPHA liver 6.52607
TATA larynx 11.6752
SRF larynx 17.3659
SMAD-4 larynx 10.3608
SF-1 larynx 9.55138
P53 larynx 7.15712
NKX2-2 larynx 6.28901
NF-KAPPAB_(P65) larynx 9.8345
NF-KAPPAB_(P50) larynx 8.62997
NF-KAPPAB larynx 8.9813
NF-1 larynx 7.67747
MIF-1 larynx 10.4312
MEF-2 larynx 7.44835
LUN-1 larynx 10.4544
GR larynx 6.4367
FXR larynx 10.8134
ETF larynx 7.07465
ERR_ALPHA larynx 8.14905
E2F-1 larynx 11.9738
E2F larynx 7.46849
CHX10 larynx 7.12042
C/EBP larynx 8.21626
BSAP larynx 7.46686
BRN-2 larynx 7.96699
AP-4 larynx 8.24415
AP-2GAMMA larynx 6.88943
STAT5A kidney 7.39758
STAT4 kidney 8.61199
OCT-1 kidney 11.3792
NKX2-2 kidney 6.96699
HSF kidney 6.64636
HNF-4ALPHA kidney 16.4428
HNF-1 kidney 8.68023
FREAC-2 kidney 7.46519
FOXO3 kidney 6.71829
FOXO1 kidney 9.57066
CRX kidney 6.3439
ZID heart 8.71671
YY1 heart 7.40664
USF heart 8.09961
TST-1 heart 11.8639
TITF1 heart 9.55532
TGIF heart 13.3632
TAL-1BETA/E47 heart 6.30843
STAT6 heart 7.905
STAT3 heart 9.07857
SRF heart 35.9479
SREBP-1 heart 8.96862
SP3 heart 21.0334
SMAD-4 heart 9.24643
SF-1 heart 10.3035
RSRFC4 heart 21.1323
RREB-1 heart 13.2095
PU.1 heart 13.6439
PPARALPHA/RXR-ALPHA heart 10.1479
POU1F1 heart 11.1706
PITX2 heart 6.90899
NRSF heart 12.0065
NF-KAPPAB_(P65) heart 7.92895
NF-KAPPAB_(P50) heart 8.87017
NF-E2 heart 18.9785
MZF1 heart 11.2354
MYOD heart 11.9358
MTF-1 heart 8.02008
MEIS1 heart 14.0465
MEF-2 heart 21.8976
MAZR heart 16.9494
MAZ heart 25.8573
LBP-1 heart 6.4409
IPF1 heart 6.43286
HNF-3ALPHA heart 10.0079
HNF-1 heart 7.83853
HEB heart 12.6273
GATA-X heart 13.1628
GATA-6 heart 7.66116
GATA-2 heart 10.1418
GATA-1 heart 8.57008
E2F heart 9.15755
COUP-TF/HNF-4 heart 8.83337
C/EBP heart 6.99639
C-MYC/MAX heart 8.54911
C-ETS-1 heart 6.38457
BSAP heart 20.468
BRN-2 heart 8.99714
BACH1 heart 11.8862
ARNT heart 6.67369
AP-4 heart 16.3926
AP-2REP heart 8.34428
AP-1 heart 17.5307
AMEF-2 heart 11.3966
ALPHA-CP1 heart 11.5243
PITX2 eye 6.64646
CHX10 eye 9.21553
SMAD-3 brain 10.5392
RREB-1 brain 9.60531
OCT-1 brain 7.57459
MEIS1 brain 7.50553
HIF-1 brain 7.77983
GCM brain 6.83258
GATA-1 brain 6.86692
FOXJ2 brain 9.24697
ER brain 6.51427
E47 brain 8.64753
CDP brain 6.35253
PEA3 bone_marrow 6.58852
E2F-1 bone_marrow 6.58996
NF-E2 bone 7.26027

Distribution of Co-regulatory TFs

Description: this pie chart displays the distribution of co-regulatory transcription factors (TFs) in different tissues.

Color schema: the tissue with the largest percentage of co-regulatory TFs is colored dark red whereas the tissue with the smallest percentage of co-regulatory TFs is colored dark blue. Tissues with intermediate percentages of co-regulatory TFs are colored from light red to yellow and cyan and then to light blue.