Bioinformatics Lab @ Wilmer Institute, Johns Hopkins University

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CRX has 125 co-regulatory transcription factors (TFs)

Summary Table (Download Table)

Co-regulatory TF Tissue -log(P)
CHX10 eye 28.4156
HNF-1 kidney 23.6826
COUP-TF/HNF-4 kidney 22.6516
PITX2 eye 19.1884
HNF-1 small_intestine 19.1628
CRX eye 18.5542
HNF-4ALPHA kidney 16.8834
NKX6-2 small_intestine 15.6923
LHX3 small_intestine 15.1019
STAT5A eye 12.929
FXR eye 12.8655
TAL-1BETA/ITF-2 eye 12.8105
TAL-1BETA/E47 eye 12.7791
HNF-1 liver 12.23
C/EBP muscle 11.6189
C-ETS-1 thymus 11.0019
OCT-1 eye 10.7224
MZF1 eye 10.6372
OCT-X eye 10.5787
AP-1 bladder 10.5385
NF-AT small_intestine 10.2656
MYOD eye 10.2535
RSRFC4 kidney 10.0576
HNF-4 kidney 10.0307
TAL-1BETA/ITF-2 muscle 9.93203
TITF1 small_intestine 9.75982
ALPHA-CP1 eye 9.5751
GCNF eye 9.4728
HAND1/E47 eye 9.43669
MEF-2 kidney 9.41347
TATA small_intestine 9.40666
DBP eye 9.31748
LHX3 kidney 8.96762
ZIC2 small_intestine 8.96287
CART-1 kidney 8.96144
MEIS1B/HOXA9 small_intestine 8.89928
NF-Y eye 8.86438
AFP1 colon 8.73841
FREAC-7 pancreas 8.73462
PPARG eye 8.72554
TGIF prostate 8.44445
RSRFC4 heart 8.39859
GCM skin 8.31604
MYOGENIN/NF-1 eye 8.2299
TGIF heart 8.20313
GATA-6 liver 8.11103
TGIF muscle 8.06602
NRL eye 8.04848
SF-1 eye 7.93716
FOXJ2 blood 7.90129
ARP-1 kidney 7.89052
HSF1 kidney 7.86992
NF-Y kidney 7.82544
USF muscle 7.65975
MZF1 larynx 7.65811
NKX3A bladder 7.64753
MEF-2 muscle 7.43694
POU3F2 liver 7.42921
ATF6 eye 7.42028
PPARG muscle 7.33609
FOXO1 kidney 7.33375
SREBP-1 muscle 7.31407
FOXO4 kidney 7.29844
COUP-TF/HNF-4 liver 7.29691
FREAC-3 brain 7.23426
GATA-6 kidney 7.23349
AREB6 prostate 7.23102
SP3 eye 7.2011
FOXO1 bladder 7.18276
POU3F2 prostate 7.15041
ALPHA-CP1 small_intestine 7.13602
GATA-1 liver 7.10247
HNF-1 colon 7.09279
C/EBP brain 7.07122
GATA-1 eye 7.06785
NKX3A kidney 6.97093
NKX6-2 heart 6.96831
C/EBP kidney 6.9626
PAX-2 liver 6.92513
NF-1 brain 6.92373
STAT6 prostate 6.90886
HFH-3 small_intestine 6.90208
SRY kidney 6.89318
SMAD-3 kidney 6.87519
E2F-1/DP-2 eye 6.84831
AFP1 small_intestine 6.8137
NF-KAPPAB small_intestine 6.81338
POU3F2 bladder 6.79008
FAC1 eye 6.77859
CDP_CR1 lung 6.75604
FXR kidney 6.75061
TEF eye 6.74002
RORALPHA2 eye 6.70131
POU3F2 blood 6.68448
TCF11/MAFG eye 6.65524
NKX3A small_intestine 6.65406
CDP eye 6.64335
FOXO3 brain 6.61835
LUN-1 muscle 6.56729
TGIF kidney 6.56585
BACH1 stomach 6.51808
LBP-1 muscle 6.51264
C-MYC/MAX brain 6.50523
STAT1 eye 6.46902
C-MYC/MAX muscle 6.45676
MTF-1 skin 6.41443
CDP muscle 6.40465
MEIS1B/HOXA9 muscle 6.40432
CART-1 small_intestine 6.39071
PBX-1 pancreas 6.35689
SRF kidney 6.3439
HNF-4ALPHA eye 6.30925
LUN-1 eye 6.30802
CDP_CR3+HD eye 6.30078
OCT-1 colon 6.28318
C/EBP pancreas 6.27502
HNF-1 eye 6.27457
STAT6 eye 6.27384
CDP_CR3+HD muscle 6.25703
AREB6 uterus 6.25462
C/EBPBETA eye 6.24893
LUN-1 soft_tissue 6.22788
LHX3 prostate 6.22441
HNF-3ALPHA liver 6.2135
ZIC2 eye 6.21176

Distribution of Co-regulatory TFs

Description: this pie chart displays the distribution of co-regulatory transcription factors (TFs) in different tissues.

Color schema: the tissue with the largest percentage of co-regulatory TFs is colored dark red whereas the tissue with the smallest percentage of co-regulatory TFs is colored dark blue. Tissues with intermediate percentages of co-regulatory TFs are colored from light red to yellow and cyan and then to light blue.