Bioinformatics Lab @ Wilmer Institute, Johns Hopkins University

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CDP has 132 co-regulatory transcription factors (TFs)

Summary Table (Download Table)

Co-regulatory TF Tissue -log(P)
AFP1 colon 15.1635
ALPHA-CP1 peripheral_nervous_system 10.2478
ALX-4 colon 13.8605
ALX-4 muscle 8.72179
AP-1 heart 7.14317
ARP-1 liver 6.6417
BRN-2 peripheral_nervous_system 6.84917
BSAP placenta 6.2435
C/EBP eye 8.13094
C/EBP muscle 13.2431
C/EBP small_intestine 7.69168
C/EBPALPHA brain 6.98435
C/EBPALPHA muscle 13.9631
C/EBPBETA muscle 12.9793
C/EBPGAMMA blood 6.20737
CART-1 blood 6.35295
CART-1 small_intestine 6.45335
CDC5 brain 6.33709
CDP colon 7.53143
CDP_CR1 muscle 6.8821
CDP_CR3+HD muscle 10.5
CHX10 eye 18.0681
CHX10 placenta 6.7773
COUP-TF/HNF-4 liver 7.55889
CRX eye 6.64335
CRX muscle 6.40465
E2F heart 6.46737
E47 peripheral_nervous_system 7.25338
E4BP4 brain 11.9341
E4BP4 kidney 8.48062
EF-C small_intestine 8.15907
ELF-1 blood 6.29595
FAC1 peripheral_nervous_system 10.713
FAC1 placenta 7.03414
FOXJ2 colon 6.20251
FOXJ2 pancreas 6.26751
FOXO4 colon 18.5433
GATA-1 eye 10.2419
GATA-1 heart 8.60131
GATA-1 peripheral_nervous_system 7.44175
GATA-6 brain 6.42948
GATA-6 heart 14.4875
GATA-6 placenta 6.57362
GCM brain 7.6992
GCNF colon 11.6473
GR muscle 6.88856
HFH-3 colon 7.62228
HFH-3 pancreas 7.17594
HFH-3 small_intestine 6.78202
HNF-1 colon 17.3554
HNF-1 liver 20.9496
HNF-1 small_intestine 6.67268
HNF-3ALPHA colon 6.55167
HNF-3ALPHA liver 6.57739
HNF-4ALPHA liver 11.5469
HNF-6 colon 10.312
HSF1 muscle 7.96982
HSF2 peripheral_nervous_system 8.89687
IPF1 peripheral_nervous_system 9.37501
IRF1 colon 8.68698
LHX3 placenta 8.95015
LHX3 small_intestine 17.2252
LMO2_COMPLEX heart 6.37965
MEF-2 heart 6.63234
MEF-2 mammary_gland 7.13928
MIF-1 heart 6.21448
MIF-1 small_intestine 7.43566
MRF-2 colon 15.673
MRF-2 lung 8.75249
MRF-2 small_intestine 6.65644
NF-AT small_intestine 7.4568
NF-Y peripheral_nervous_system 11.8604
NKX3A peripheral_nervous_system 7.75214
NKX6-1 colon 11.6957
NKX6-2 blood 17.6386
NKX6-2 heart 7.55406
NKX6-2 small_intestine 9.72127
NR2E3 small_intestine 7.86957
NRSF brain 8.00621
OCT-1 brain 11.464
OCT-1 colon 12.6139
OCT-1 eye 8.88712
OCT-1 muscle 8.2344
OCT-X colon 9.54774
OSF2 soft_tissue 6.74815
PAX-2 placenta 7.58097
PAX-8 brain 11.4943
PAX-8 kidney 6.51228
PBX-1 heart 7.5574
PBX-1 muscle 8.07573
PBX-1 small_intestine 7.51139
POU3F2 brain 10.9604
POU3F2 peripheral_nervous_system 7.46585
POU3F2 placenta 6.22015
POU3F2 small_intestine 8.97229
POU3F2 stomach 6.32409
POU3F2 uterus 7.68342
PPAR peripheral_nervous_system 7.13559
RORALPHA1 eye 6.99747
RORALPHA1 soft_tissue 6.76442
RP58 peripheral_nervous_system 7.36461
RREB-1 peripheral_nervous_system 7.69987
RSRFC4 mammary_gland 10.9986
RSRFC4 spleen 10.1163
SF-1 colon 6.3718
SF-1 soft_tissue 7.38993
SMAD-3 mammary_gland 8.32647
SOX-9 skin 6.72907
SRF brain 6.35253
SRY peripheral_nervous_system 7.69111
SRY skin 7.29602
SRY small_intestine 7.10754
STAT6 brain 7.31129
STATX liver 6.62887
TAL-1ALPHA/E47 brain 8.3426
TATA colon 12.177
TATA mammary_gland 7.88807
TBP colon 13.2869
TBP mammary_gland 7.95906
TBP peripheral_nervous_system 8.6508
TBP spleen 6.38152
TCF11 soft_tissue 6.95432
TEF colon 8.5249
TEF eye 6.3566
TEF muscle 12.7476
TEF small_intestine 7.18678
TGIF placenta 7.28186
TITF1 muscle 7.91604
TST-1 brain 14.9481
TST-1 colon 6.97487
WHN small_intestine 7.46455
XBP-1 kidney 8.19994

Distribution of Co-regulatory TFs

Description: this pie chart displays the distribution of co-regulatory transcription factors (TFs) in different tissues.

Color schema: the tissue with the largest percentage of co-regulatory TFs is colored dark red whereas the tissue with the smallest percentage of co-regulatory TFs is colored dark blue. Tissues with intermediate percentages of co-regulatory TFs are colored from light red to yellow and cyan and then to light blue.