Protein
NCBI GeneID
Class
Sub class
Motif
Logo
SSX3
10214
TF
29
CREB1
1385
TF
bZIP_2
29
HOXB9
3219
TF
Homeobox
29
TP73
7161
TF
P53
27
RAB18
22931
TF
28
SMAD4
4089
TF
MH
27
PSMC2
5701
TF
27
TRMT1
55621
TF
27
TFAP2C
7022
TF
27
ZNF26
7574
TF
Zf-C2H2
27
HHEX
3087
TF
Homeobox
26
TFAM
7019
TF
HMG_box
26
MYF6
4618
TF
HLH
25
YEATS4
8089
TF
25
RFX4
5992
TF
RFX
23
MEIS3
56917
TF
Homeobox
23
MLX
6945
TF
HLH
23
RARG
5916
TF
zf-C4
23
TFE3
7030
TF
HLH
23
KLF3
51274
TF
Zf-C2H2
22
ZNF655
79027
TF
Zf-C2H2
21
RFXANK
8625
TF
21
RXRA
6256
TF
zf-C4
21
CNOT6
57472
TF
21
ZBTB4
57659
TF
Zf-C2H2
21
LAS1L
81887
TF
20
JARID1D
8284
TF
20
ZNF3
7551
TF
Zf-C2H2
20
CPSF4
10898
TF
zf-CCHC
19
PHOX2A
401
TF
Homeobox
18
FHL2
2274
TF
18
TSNAX
7257
TF
18
ZBTB25
7597
TF
Zf-C2H2
18
RBM9
23543
TF
18
ZHX3
23051
TF
Homeobox
17
JDP2
122953
TF
bZIP_2
17
ZBED1
9189
TF
17
POU3F2
5454
TF
Homeobox
17
GTF3C2
2976
TF
16
SEMA4A
64218
TF
16
ENO1
2023
TF
15
NME1
4830
TF
15
ZNF238
10472
TF
Zf-C2H2
15
NKX2-3
159296
TF
Homeobox
14
TRIM69
140691
TF
14
ZNF695
57116
TF
Zf-C2H2
14
PRRX1
5396
TF
Homeobox
14
SND1
27044
TF
14
SCAND2
54581
TF
14
LARP1
23367
TF
12
TCEAL2
140597
TF
13
OLIG3
167826
TF
HLH
13
MYEF2
50804
TF
12
SNAPC5
10302
TF
12
ZNF205
7755
TF
Zf-C2H2
12
IRF6
3664
TF
IRF
12
TGIF1
7050
TF
Homeobox
12
RAN
5901
TF
12
ZNF160
90338
TF
Zf-C2H2
12
HCLS1
3059
TF
11
AFF4
27125
TF
11
SOX13
9580
TF
HMG_box
11
ZNF326
284695
TF
11
ZNF124
7678
TF
Zf-C2H2
11
USF2
7392
TF
HLH
11
MEF2B
4207
TF
SRF
11
GTF2B
2959
TF
11
TEAD1
7003
TF
TEA
11
HIP2
3093
TF
11
ZNF131
7690
TF
Zf-C2H2
11
PQBP1
10084
TF
10
POU4F3
5459
TF
Homeobox
10
CHES1
1112
TF
10
ZNF76
7629
TF
Zf-C2H2
10
PAX3
5077
TF
Paired-box
10
THRA
7067
TF
zf-C4
11
CCDC16
91603
TF
10
EVX1
2128
TF
Homeobox
10
HOXD3
3232
TF
Homeobox
9
PDLIM5
10611
TF
9
NFATC3
4775
TF
TIG
9
ETV4
2118
TF
Ets
9
PAXIP1
22976
TF
9
ZNF720
124411
TF
9
PURG
29942
TF
9
PLAGL1
5325
TF
Zf-C2H2
9
DLX6
1750
TF
Homeobox
9
TCF3
6929
TF
HLH
8
SMAD3
4088
TF
MH
8
SCMH1
22955
TF
8
NCALD
83988
TF
8
SSX2
6757
TF
7
VAX2
25806
TF
Homeobox
7
USF1
7391
TF
HLH
7
HOXB13
10481
TF
Homeobox
7
KLF4
9314
TF
Zf-C2H2
7
INSM1
3642
TF
Zf-C2H2
7
HSF1
3297
TF
Head-Shock
7
ZNF503
84858
TF
7
DDX20
11218
TF
6
ZFP3
124961
TF
Zf-C2H2
6
MYOD1
4654
TF
HLH
6
C19orf25
148223
TF
6
MXD4
10608
TF
HLH
6
TULP1
7287
TF
6
TFEB
7942
TF
HLH
6
KCNIP1
30820
TF
6
PRKRIR
5612
TF
6
PIR
8544
TF
6
SSBP3
23648
TF
6
ZNF250
58500
TF
Zf-C2H2
6
SNAPC4
6621
TF
Myb
6
TAF1A
9015
TF
6
ZNF706
51123
TF
5
OTUD4
54726
TF
5
ESRRA
2101
TF
zf-C4
5
LHX2
9355
TF
Homeobox
5
ESX1
80712
TF
Homeobox
5
MAGEF1
64110
TF
5
PITX1
5307
TF
Homeobox
5
MECP2
4204
TF
AT_hook
5
NFATC4
4776
TF
TIG
5
ELF2
1998
TF
Ets
5
NFIL3
4783
TF
bZIP_2
5
NMRAL1
57407
TF
5
ZNF385
25946
TF
5
HTATIP2
10553
TF
5
MAGED4
81557
TF
5
NR4A1
3164
TF
zf-C4
5
BARX1
56033
TF
Homeobox
5
FOXP4
116113
TF
Fork head
5
PKNOX2
63876
TF
Homeobox
5
CEBPG
1054
TF
bZIP_2
5
CBFB
865
TF
5
ZNF207
7756
TF
4
LHX4
89884
TF
Homeobox
4
BAD
572
TF
4
HMG20A
10363
TF
HMG_box
4
ZBTB46
140685
TF
Zf-C2H2
4
LASS4
79603
TF
4
TSC22D4
81628
TF
TSC22
4
OLIG1
116448
TF
HLH
4
ETS1
2113
TF
Ets
4
RARA
5914
TF
zf-C4
4
SMAD2
4087
TF
MH
4
ZNF304
57343
TF
Zf-C2H2
4
ZNF192
7745
TF
Zf-C2H2
4
ZNF323
64288
TF
Zf-C2H2
4
THRAP6
90390
TF
4
ARNTL
406
TF
HLH
4
THAP5
168451
TF
4
GTF2H3
2967
TF
4
PDCD11
22984
TF
4
ZBTB12
221527
TF
Zf-C2H2
4
FLI1
2313
TF
Ets
4
IRF1
3659
TF
IRF
4
RARB
5915
TF
zf-C4
3
ZNF193
7746
TF
Zf-C2H2
3
RFX3
5991
TF
RFX
3
GRHL1
29841
TF
3
ZNF766
90321
TF
Zf-C2H2
3
TBPL1
9519
TF
3
HCFC2
29915
TF
3
TGIF2LX
90316
TF
Homeobox
3
HDAC8
55869
TF
3
TIMELESS
8914
TF
3
CREB3L1
90993
TF
bZIP_2
3
POLE3
54107
TF
3
RBBP5
5929
TF
3
TFAP2A
7020
TF
3
COBRA1
25920
TF
3
GTF3C5
9328
TF
3
FEZF2
55079
TF
Zf-C2H2
3
ZNF313
55905
TF
3
NRL
4901
TF
bZIP-Maf
3
ID2
3398
TF
HLH
3
ZNF671
79891
TF
Zf-C2H2
3
ZBTB43
23099
TF
Zf-C2H2
3
HES5
388585
TF
HLH
3
CBFA2T2
9139
TF
3
NFIB
4781
TF
MH
3
TAF9
6880
TF
3
ZNF71
58491
TF
Zf-C2H2
3
NR4A2
4929
TF
zf-C4
3
VPS4B
9525
TF
3
PHTF1
10745
TF
3
RUFY3
22902
TF
3
SF1
7536
TF
zf-CCHC
3
NUCB1
4924
TF
3
FOSL1
8061
TF
bZIP_2
3
JARID1A
5927
TF
3
NFIX
4784
TF
MH
3
EBF1
1879
TF
TIG
3
ZCCHC14
23174
TF
zf-CCHC
3
ASCC1
51008
TF
3
BRD3
8019
TF
46
IRF3
3661
TF
IRF
338
MAX
4149
TF
HLH
244
LIN28
79727
TF
zf-CCHC
201
ZCRB1
85437
TF
zf-CCHC
174
PRDM10
56980
TF
Zf-C2H2
162
ZNF498
221785
TF
Zf-C2H2
150
CNBP
7555
TF
zf-CCHC
149
ZNF691
51058
TF
Zf-C2H2
131
TTRAP
51567
TF
130
POU6F1
5463
TF
Homeobox
130
KHDRBS1
10657
TF
128
YBX2
51087
TF
123
SOX9
6662
TF
HMG_box
91
RCOR3
55758
TF
Myb
90
TBX20
57057
TF
T-box
88
SNAI1
6615
TF
Zf-C2H2
88
YBX1
4904
TF
88
TERF1
7013
TF
Myb
83
ZCCHC9
84240
TF
zf-CCHC
84
ZNF765
91661
TF
Zf-C2H2
81
ETV7
51513
TF
Ets
79
OTEX
158800
TF
75
CBFA2T3
863
TF
73
PPIE
10450
TF
71
ZNF461
92283
TF
Zf-C2H2
66
MAFB
9935
TF
bZIP-Maf
66
ISL1
3670
TF
Homeobox
66
GLRX2
51022
TF
65
ZRANB2
9406
TF
64
METTL3
56339
TF
64
HTATIP
10524
TF
61
NME2
4831
TF
60
OLIG2
10215
TF
HLH
60
ZNF34
80778
TF
Zf-C2H2
59
ZBTB22
9278
TF
Zf-C2H2
59
LOC93349
93349
TF
57
PBX2
5089
TF
Homeobox
56
TFAP2E
339488
TF
55
PKNOX1
5316
TF
Homeobox
53
ZCCHC13
389874
TF
zf-CCHC
53
SOX5
6660
TF
HMG_box
52
SMARCC2
6601
TF
Myb
52
IRF8
3394
TF
IRF
51
NFATC1
4772
TF
TIG
50
NRF1
4899
TF
47
RBPJ
3516
TF
TIG
45
SSX4
6759
TF
43
MNDA
4332
TF
43
CREB5
9586
TF
bZIP_2
42
ZNF606
80095
TF
Zf-C2H2
41
ZNF784
147808
TF
Zf-C2H2
40
ARID3B
10620
TF
39
ING1
3621
TF
38
SFMBT1
51460
TF
37
MEIS2
4212
TF
Homeobox
37
ZBTB7A
51341
TF
Zf-C2H2
37
ZMYM3
9203
TF
33
OTX2
5015
TF
Homeobox
33
NPM1
4869
TF
32
TCF7
6932
TF
HMG_box
31
C14orf106
55320
TF
Myb
30
TTF2
8458
TF
2
MLLT3
4300
TF
2
RYBP
23429
TF
2
RFPL3
10738
TF
2
ZNF253
56242
TF
Zf-C2H2
2
TRIM32
22954
TF
2
PPARD
5467
TF
zf-C4
2
ZCCHC8
55596
TF
zf-CCHC
2
CRSP8
9442
TF
2
JMJD2D
55693
TF
2
SOX10
6663
TF
HMG_box
2
STAT3
6774
TF
STAT
2
ATOH7
220202
TF
HLH
2
HBP1
26959
TF
HMG_box
2
Zfp212
232784
TF
2
TMIGD2
126259
TF
2
TADA2L
6871
TF
Myb
2
ZNF471
57573
TF
Zf-C2H2
2
TRIM31
11074
TF
2
MEIS1
4211
TF
Homeobox
2
GATA1
2623
TF
GATA
2
NFKBIL2
4796
TF
2
DSCR1
1827
TF
2
CRY1
1407
TF
2
HMGN2
3151
TF
2
ZSCAN20
7579
TF
Zf-C2H2
2
TWIST2
117581
TF
2
SMARCA4
6597
TF
2
ZBED5
58486
TF
2
DMRTC2
63946
TF
DM
2
ZNF281
23528
TF
Zf-C2H2
2
KLF12
11278
TF
Zf-C2H2
2
EP400
57634
TF
2
ZNF410
57862
TF
Zf-C2H2
2
BLOC1S1
2647
TF
2
ZFAND5
7763
TF
2
APLP2
334
TF
2
SP110
3431
TF
2
SRF
6722
TF
SRF
2
SIRT2
22933
TF
2
ZCCHC3
85364
TF
zf-CCHC
2
ZNF74
7625
TF
Zf-C2H2
2
ZFP106
64397
TF
Zf-C2H2
2
TIAL1
7073
TF
2
FOXN2
3344
TF
Fork head
2
PAPD1
55149
TF
2
BLZF1
8548
TF
2
CREBL1
1388
TF
2
THAP3
90326
TF
2
SIRT1
23411
TF
1
UNKL
64718
TF
2
TOX2
84969
TF
HMG_box
2
ZNF587
84914
TF
Zf-C2H2
2
NR1H3
10062
TF
zf-C4
2
HPCAL1
3241
TF
2
RCVRN
5957
TF
2
MAGEA4
4103
TF
2
RXRB
6257
TF
zf-C4
2
CHD4
1108
TF
2
ZBTB16
7704
TF
Zf-C2H2
2
ZNF646
9726
TF
Zf-C2H2
2
ZKSCAN5
23660
TF
Zf-C2H2
2
JMJD2C
23081
TF
2
POLR3K
51728
TF
2
HDAC1
3065
TF
2
ELK1
2002
TF
Ets
2
ZBTB3
79842
TF
Zf-C2H2
2
KLF15
28999
TF
Zf-C2H2
2
FUBP3
8939
TF
2
ZNF641
121274
TF
Zf-C2H2
2
BCL3
602
TF
2
FHL5
9457
TF
2
PROP1
5626
TF
Homeobox
1
ZNF553
197407
TF
1
NR6A1
2649
TF
zf-C4
1
ZNF501
115560
TF
Zf-C2H2
1
GTF2F2
2963
TF
1
ZXDC
79364
TF
Zf-C2H2
1
ZNF239
8187
TF
Zf-C2H2
1
LOC391749
391749
TF
1
PSIP1
11168
TF
1
ZNF683
257101
TF
Zf-C2H2
1
TFAP2B
7021
TF
1
ISGF3G
10379
TF
1
LDOC1
23641
TF
1
ZNF668
79759
TF
Zf-C2H2
1
GTF3C3
9330
TF
1
SP100
6672
TF
HMG_box
1
HEMK1
51409
TF
1
SIX1
6495
TF
Homeobox
1
ZNF555
148254
TF
Zf-C2H2
1
ZNF215
7762
TF
Zf-C2H2
1
ZNF331
55422
TF
Zf-C2H2
1
FKBP1A
2280
TF
1
ZYX
7791
TF
1
ATG4B
23192
TF
1
LOC55565
55565
TF
1
BATF
10538
TF
bZIP_2
1
GSCL
2928
TF
1
HSF4
3299
TF
Head-Shock
1
RCOR1
23186
TF
Myb
1
GLIS2
84662
TF
Zf-C2H2
1
CEP250
11190
TF
1
KLF11
8462
TF
Zf-C2H2
1
ZFP161
7541
TF
Zf-C2H2
1
GMEB1
10691
TF
1
ZNF444
55311
TF
Zf-C2H2
1
PLRG1
5356
TF
1
ZNF37A
7587
TF
Zf-C2H2
1
ZNF273
10793
TF
Zf-C2H2
1
YY1
7528
TF
Zf-C2H2
1
NFIC
4782
TF
MH
1
IRF5
3663
TF
IRF
1
BMI1
648
TF
1
NKX2-5
1482
TF
Homeobox
1
GTF2IRD1
9569
TF
1
KLF8
11279
TF
Zf-C2H2
1
KLHL29
114818
TF
1
HMGN1
3150
TF
1
PAX8
7849
TF
Paired-box
1
SMAD6
4091
TF
MH
1
IRX2
153572
TF
Homeobox
1
ZBTB7B
51043
TF
Zf-C2H2
1
SPDEF
25803
TF
Ets
1
PPARA
5465
TF
zf-C4
1
MAZ
4150
TF
Zf-C2H2
1
ZNF711
7552
TF
Zf-C2H2
1
IRX5
10265
TF
Homeobox
1
TWIST1
7291
TF
HLH
1
FOXP1
27086
TF
Fork head
1
C16orf80
29105
TF
1
E2F8
79733
TF
E2F
1
CHRAC1
54108
TF
1
FAM44A
259282
TF
1
IKZF1
10320
TF
Zf-C2H2
1
ZNF345
25850
TF
Zf-C2H2
1
HOXC8
3224
TF
Homeobox
1
HOXD8
3234
TF
Homeobox
1
EDF1
8721
TF
1
TRIM34
53840
TF
1
MIER2
54531
TF
Myb
1
MXD3
83463
TF
HLH
1
CCNC
892
TF
1
EZH2
2146
TF
1
ELF1
1997
TF
Ets
1
ERF
2077
TF
Ets
1
GABPA
2551
TF
Ets
1
DMRT3
58524
TF
DM
1
ATF7
11016
TF
bZIP_2
1
MBD5
55777
TF
MBD
1
TP53
7157
TF
P53
1
ZNF436
80818
TF
Zf-C2H2
1
ZBTB1
22890
TF
Zf-C2H2
1
ADNP
23394
TF
Zf-C2H2
1
ZNF182
7569
TF
Zf-C2H2
1
MID2
11043
TF
1
PAX6
5080
TF
Paired-box
1
TAF6
6878
TF
1
HOXB1
3211
TF
Homeobox
1
EGR2
1959
TF
Zf-C2H2
1
ZNF134
7693
TF
Zf-C2H2
1
CEBPE
1053
TF
bZIP_2
1
TRIM26
7726
TF
1
RNF141
50862
TF
1
PGBD1
84547
TF
1
TRIM25
7706
TF
1
SIX2
10736
TF
Homeobox
1
RY1
11017
TF
1
SLC30A9
10463
TF
1
E2F5
1875
TF
E2F
1
ZNF289
84364
TF
1
TBX2
6909
TF
T-box
1
SMARCC1
6599
TF
Myb
1
NFE2
4778
TF
bZIP_1
1
JMJD1B
51780
TF
1
NR3C1
2908
TF
zf-C4
1
WBP11
51729
TF
1
ZNF277
11179
TF
Zf-C2H2
1
FOXC1
2296
TF
Fork head
1
FOXB1
27023
TF
Fork head
1
ID4
3400
TF
HLH
1
RFX1
5989
TF
RFX
1
TCEB2
6923
TF
1
ZSCAN21
7589
TF
Zf-C2H2
1
KLHL3
26249
TF
1
SSBP4
170463
TF
1
Zfp617
170938
TF
1
CORO1A
11151
TF
1
TFPT
29844
TF
1
IRF2
3660
TF
IRF
1
THAP4
51078
TF
1
HEXIM1
10614
TF
1
IVNS1ABP
10625
TF
1
NCOA4
8031
TF
1
DMTF1
9988
TF
Myb
1
SUMO1
7341
TF
1
SOLH
6650
TF
1
NFIA
4774
TF
MH
1
EBF4
57593
TF
TIG
1
BARX2
8538
TF
Homeobox
1
TEAD2
8463
TF
TEA
1
ZNF342
162979
TF
1
MYCN
4613
TF
HLH
1
HES1
3280
TF
HLH
1
TRIM22
10346
TF
1
PRDM9
56979
TF
Zf-C2H2
1
ZNF496
84838
TF
Zf-C2H2
1
EYA2
2139
TF
1
ZNF302
55900
TF
Zf-C2H2
1
C13orf15
28984
TF
1
HSBP1
3281
TF
1
ZBED2
79413
TF
1
ZCCHC7
84186
TF
zf-CCHC
1
ZBTB33
10009
TF
Zf-C2H2
1
ZNF507
22847
TF
Zf-C2H2
1
PPARG
5468
TF
zf-C4
1
NR2E1
7101
TF
zf-C4
1
ZNF408
79797
TF
Zf-C2H2
1
ZNF613
79898
TF
Zf-C2H2
1
PRR7
80758
TF
1
TRIM40
135644
TF
1
RBM4B
83759
TF
zf-CCHC
1
ZNF491
126069
TF
Zf-C2H2
1
CXXC1
30827
TF
1
We calculated the consensus sequences for the proteins with number of binding motifs between 3 and 29.
The proteins with more than 30 binding motifs are considered as either non specific or binding to T7 promoter
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