SOX9

ProteinSOX9
NCBI GeneID6662
ClassTF
Sub classHMG_box  
Protein SequenceSOX9
Binding Motifs
TTGATTGAT
TTAAAATTCA
TGTCCT
AATTATTCA
CCTTATATGG
CCCGTGACC
AACAAAG
ATTTTAA
TTCCGCC
CCCTCCTC
TGTCAGCATTTCCATTATGA
TAATGAGCTCATTA
GTTTTCATTAAAGC
TTGCTTTTGGCAAAAGTTCT
AATTGCTTCCAGATG
GCTAATTGCAAATG
TTGAAGCAATTAGC
GAAATGCAATTTGC
GTTAATTGGAATCA
AGCTGCAAATTGCATTC
TCATTTTGCAAGTGCAA
ATTCATTTTGGCTTTGAAAG
TGCATATTCATGAG
TTTCCAATTAAGCT
AACTCCCATTAGCGTTAATGG
TCCCATTGACTTCAATGGGA
CTCCCATTGACTTCAATGG
TGACTGTGAAATTACAG
AAAAGCAATTTCCT
TCTGGAAAAGCACATTTGAT
TGGCTTTAATGA
GGAAATCTGTTTGC
ATGGCTTTCCAAATG
TCATCCAGATGTTTGGC
GATTTCATTTGAATGCT
TGCCTAATTACACA
CAAGATTAATGGCT
AGAACATCTGTTTC
CATTTCTCAGAAATGACT
CCGGAAGT
TGACATCA
CAAAATGGC
GGCGCTCGCTGGTGACG
TGCGCACG
TTTAAAG
GCTTACTCA
GTTCCCATGGCAAC
AATGAATGGA
CTTTCGATTT
CGCCATGGCAAC
TAGCTACGA
CTGTGCCCC
TTGATTTAA
CAGTTATGT
GACGACGAA
AGCGGCG
GGCGCCC
CTGCGGC
CGCTGCC
CGGGCTC
ACGCGGC
TGGGCGC
ACCCCGC
CCGGAAC
GATTTGCATTGCAAATG
TGACAGTAATTAGC
CAACTGTGAAATTG
CAAATTGAATTTTCC
GAATTATCCAGATAATTGC
CATTAATCAGCATT
GCTTTCAGAAATCC
TGAATTCATTTTCCAAAGCA
TATTGTGTA
AACCGTCG
AGGACGAT
CCCGATAG
CACGACGC
AAAACGTA
AGTCTCTA
GTAAGCTC
AAGTATGG
GAACCTCA
CATACAAG
AGGCAATA
CATGTACC
GCGTGGAA
GGGTACGG
TATGCTTA
ACGGAGTA
CAGCTACC
CGCATAAA

When we calculated the concensus sequences for proteins, we also considered the spacer between two repeated motif sequences.
Click the motif sequence to find the spacer sequence

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