| Protein | NCBI GeneID | Class | Sub class | Motif | Logo |
| RFC2 | 5982 | uDBP | DNA_replication | 27 |  |
| RFC3 | 5983 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 14 |  |
| APEX2 | 27301 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication;Mitochondrial_protein | 14 |  |
| RUVBL1 | 8607 | uDBP | chromatin_associated_protein;DNA_replication | 12 |  |
| MDM2 | 4193 | uDBP | DNA_replication | 9 |  |
| UBE2V1 | 7335 | uDBP | DNA_replication | 8 |  |
| WHSC2 | 7469 | uDBP | DNA_replication | 6 |  |
| GADD45A | 1647 | uDBP | DNA_replication | 6 |  |
| XRCC1 | 7515 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 4 |  |
| EXOSC3 | 51010 | uDBP | RNA_binding_protein;DNA_replication | 4 |  |
| CD59 | 966 | uDBP | DNA_replication;Mitochondrial_protein | 3 |  |
| POLI | 11201 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 3 |  |
| SMUG1 | 23583 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 3 |  |
| PARP3 | 10039 | uDBP | DNA_replication | 408 | |
| LIG3 | 3980 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 158 | |
| RECQL | 5965 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 97 | |
| NEIL2 | 252969 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 53 | |
| UNG | 7374 | uDBP | DNA_replication;Mitochondrial_protein | 50 | |
| ORC4L | 5000 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 45 | |
| RAD51L3 | 5892 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 44 | |
| NUDT1 | 4521 | uDBP | DNA_replication | 37 | |
| LIG1 | 3978 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 34 | |
| POLDIP2 | 26073 | uDBP | DNA_replication | 32 | |
| MCM8 | 84515 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| OBFC2A | 64859 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| MCM7 | 4176 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| POGK | 57645 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| XRCC6 | 2547 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| RAD51AP1 | 10635 | uDBP | chromatin_associated_protein;DNA_replication | 2 | |
| NEIL1 | 79661 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 2 | |
| UBE2C | 11065 | uDBP | DNA_replication | 1 | |
| RAD1 | 5810 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| POLS | 11044 | uDBP | chromatin_associated_protein;DNA_replication | 1 | |
| MYL9 | 10398 | uDBP | DNA_replication | 1 | |
| JTV1 | 7965 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| XRCC4 | 7518 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| XRCC2 | 7516 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| MRLC2 | 103910 | uDBP | DNA_replication | 1 | |
| RPA2 | 6118 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| GINS2 | 51659 | uDBP | DNA_replication | 1 | |
| UBE2V2 | 7336 | uDBP | DNA_replication | 1 | |
| MCM2 | 4171 | uDBP | chromatin_associated_protein;DNA_replication | 1 | |
| PNKP | 11284 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| DDB2 | 1643 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 | |
| HUS1 | 3364 | uDBP | DNA_replication | 1 | |
| PCNA | 5111 | uDBP | Nucleic_Acid_binding_proteins;DNA_replication | 1 |
We calculated the consensus sequences for the proteins with number of binding motifs between 3 and 29.
The proteins with more than 30 binding motifs are considered as either non specific or binding to T7 promoter