EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr1>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00001chr1:441040-44268004--
HS083-00002chr1:522160-52510003--
HS083-00003chr1:539820-54199004GeneHancer
HS083-00004chr1:956360-95702002dbSUPER;HEDD
HS083-00005chr1:1003890-1004990016GeneHancer;dbSUPER
HS083-00006chr1:1652370-165268000GeneHancer;dbSUPER
HS083-00007chr1:1655510-165569000dbSUPER
HS083-00008chr1:2120780-212098000GeneHancer;dbSUPER
HS083-00009chr1:2121220-212175000GeneHancer;dbSUPER
HS083-00010chr1:2518390-251852000dbSUPER
HS083-00011chr1:4550080-455029000--
HS083-00012chr1:4765180-476540000--
HS083-00013chr1:6531700-653181005GeneHancer;dbSUPER
HS083-00014chr1:7740320-774109001GeneHancer
HS083-00015chr1:8021850-802219010--
HS083-00016chr1:8130000-813204006GeneHancer;dbSUPER;HEDD
HS083-00017chr1:8849410-885042001GeneHancer
HS083-00018chr1:9222070-922413001GeneHancer;dbSUPER;HEDD
HS083-00019chr1:9895600-989733001GeneHancer;dbSUPER;HEDD
HS083-00020chr1:9903680-990439000GeneHancer;dbSUPER;HEDD
HS083-00021chr1:9952540-995446007GeneHancer;dbSUPER
HS083-00022chr1:10459180-1045968003dbSUPER
HS083-00023chr1:10959460-10962330028GeneHancer
HS083-00024chr1:12538600-1254237002GeneHancer;dbSUPER
HS083-00025chr1:14342080-1434229001--
HS083-00026chr1:16127220-1612780000GeneHancer;dbSUPER
HS083-00027chr1:16160060-1616070001GeneHancer;dbSUPER
HS083-00028chr1:16678560-1667874000--
HS083-00029chr1:16693800-1669459002dbSUPER
HS083-00030chr1:16839340-1684133001GeneHancer;dbSUPER
HS083-00031chr1:17221960-1722369000dbSUPER
HS083-00032chr1:17230770-1723177001dbSUPER;HEDD
HS083-00033chr1:17288610-1728892000--
HS083-00034chr1:17537940-1754045001GeneHancer;dbSUPER;HEDD
HS083-00035chr1:19252680-1925468003GeneHancer;dbSUPER;HEDD
HS083-00036chr1:19281740-1928216000dbSUPER
HS083-00037chr1:20960430-2096103006HEDD
HS083-00038chr1:21112430-2111314000--
HS083-00039chr1:21948890-21951180017dbSUPER;HEDD
HS083-00040chr1:22379240-2237939000dbSUPER
HS083-00041chr1:24286490-2428708001dbSUPER
HS083-00042chr1:24306490-2430668000dbSUPER
HS083-00043chr1:24349080-2434958000GeneHancer;dbSUPER
HS083-00044chr1:24616070-2461749003GeneHancer;dbSUPER
HS083-00045chr1:25573520-2557379000dbSUPER
HS083-00046chr1:25664950-2566551001dbSUPER
HS083-00047chr1:26185380-2618577001dbSUPER
HS083-00048chr1:26438410-2643895000dbSUPER
HS083-00049chr1:26439140-2643926000dbSUPER
HS083-00050chr1:26758870-2675914001--
HS083-00051chr1:26799120-26799870014--
HS083-00052chr1:27190950-2719231001dbSUPER;HEDD
HS083-00053chr1:27357420-2735887003GeneHancer;dbSUPER
HS083-00054chr1:27692010-2769274005dbSUPER
HS083-00055chr1:28240780-2824094001--
HS083-00056chr1:28414690-2841503003--
HS083-00057chr1:28655690-2865602000dbSUPER
HS083-00058chr1:28832600-2883273001dbSUPER
HS083-00059chr1:28896620-2889683000--
HS083-00060chr1:28995350-2899626001--
HS083-00061chr1:29507580-2950815001dbSUPER
HS083-00062chr1:29564470-2956510000--
HS083-00063chr1:30246770-3024712000--
HS083-00064chr1:31295800-3129762001dbSUPER
HS083-00065chr1:31643430-3164421003GeneHancer
HS083-00066chr1:31949550-3195119000GeneHancer;dbSUPER
HS083-00067chr1:32253560-3225430000dbSUPER;HEDD
HS083-00068chr1:33225090-3322624002GeneHancer;dbSUPER;HEDD
HS083-00069chr1:33454290-3345573003GeneHancer;dbSUPER;HEDD
HS083-00070chr1:33722260-3372375002--
HS083-00071chr1:34095490-3409569008--
HS083-00072chr1:35496970-3549741000--
HS083-00073chr1:35545040-3554553000--
HS083-00074chr1:36839450-3684089001GeneHancer;dbSUPER;HEDD
HS083-00075chr1:37010300-3701083000--
HS083-00076chr1:38585710-3858594002--
HS083-00077chr1:39338760-3933896000--
HS083-00078chr1:40400010-4040072000GeneHancer;dbSUPER
HS083-00079chr1:40445690-4044839003GeneHancer;dbSUPER;HEDD
HS083-00080chr1:40562580-4056278000dbSUPER
HS083-00081chr1:41445500-4144591002--
HS083-00082chr1:41939380-4194259003GeneHancer;dbSUPER
HS083-00083chr1:41965860-4196779003GeneHancer;dbSUPER
HS083-00084chr1:42428960-4242917000--
HS083-00085chr1:43406300-4340889015GeneHancer;dbSUPER;HEDD
HS083-00086chr1:43814670-4381493004GeneHancer;dbSUPER
HS083-00087chr1:43815030-4381577001GeneHancer;dbSUPER
HS083-00088chr1:44115920-4411647000--
HS083-00089chr1:44495090-4449590000dbSUPER
HS083-00090chr1:45205680-4520618002dbSUPER
HS083-00091chr1:46016830-4601732000--
HS083-00092chr1:46215780-4621626000--
HS083-00093chr1:46646840-4664986005dbSUPER;HEDD
HS083-00094chr1:46982280-4698329000GeneHancer
HS083-00095chr1:47779060-4777970001dbSUPER
HS083-00096chr1:50266680-5026690000--
HS083-00097chr1:52830700-5283174000--
HS083-00098chr1:53642040-5364255000GeneHancer
HS083-00099chr1:53686020-5368624001--
HS083-00100chr1:53791060-5379254004dbSUPER
HS083-00101chr1:54303130-5430387000--
HS083-00102chr1:56841370-5684436002GeneHancer;dbSUPER
HS083-00103chr1:59369020-5937014004dbSUPER
HS083-00104chr1:59762820-5976322000dbSUPER
HS083-00105chr1:60138360-6013971002GeneHancer;dbSUPER
HS083-00106chr1:60139810-6014132000GeneHancer;dbSUPER
HS083-00107chr1:61203820-6120402000--
HS083-00108chr1:61795230-6179597001GeneHancer;dbSUPER
HS083-00109chr1:62846500-6284700000--
HS083-00110chr1:64795930-6479614000dbSUPER
HS083-00111chr1:65249350-6524956001--
HS083-00112chr1:65886420-6588701001dbSUPER
HS083-00113chr1:67518950-6751949000--
HS083-00114chr1:70686710-7068729003dbSUPER
HS083-00115chr1:75745790-7574629001--
HS083-00116chr1:76428200-7642854000--
HS083-00117chr1:76790650-7679086000--
HS083-00118chr1:79146340-7914654000--
HS083-00119chr1:81555470-8155568000--
HS083-00120chr1:84945190-8494547000--
HS083-00121chr1:84971100-8497169000--
HS083-00122chr1:84971980-8497211001--
HS083-00123chr1:85038940-8503992000--
HS083-00124chr1:86072340-8607326000GeneHancer;dbSUPER;HEDD
HS083-00125chr1:89457960-8945826002dbSUPER
HS083-00126chr1:91707450-9170766000--
HS083-00127chr1:92907180-9290774002GeneHancer
HS083-00128chr1:94157660-9415991003GeneHancer;dbSUPER;HEDD
HS083-00129chr1:94344220-9434463000--
HS083-00130chr1:94374070-9437459000--
HS083-00131chr1:94533120-9453607004GeneHancer;dbSUPER;HEDD
HS083-00132chr1:95084860-9509008000GeneHancer;dbSUPER
HS083-00133chr1:95113750-9511489000GeneHancer;dbSUPER;HEDD
HS083-00134chr1:95330460-9533136005GeneHancer;dbSUPER
HS083-00135chr1:95538240-9553831000--
HS083-00136chr1:98631940-9863215000--
HS083-00137chr1:99127470-9912825000--
HS083-00138chr1:105412410-10541328000--
HS083-00139chr1:108193430-10819363000--
HS083-00140chr1:109419850-10942010002--
HS083-00141chr1:109505420-10950598000--
HS083-00142chr1:109756750-10975716000dbSUPER
HS083-00143chr1:109968340-10996892002--
HS083-00144chr1:110777530-11077911012GeneHancer;dbSUPER;HEDD
HS083-00145chr1:111388890-11138911000--
HS083-00146chr1:116979540-11697981000--
HS083-00147chr1:117098890-11709988001GeneHancer;dbSUPER
HS083-00148chr1:117131730-11713237001GeneHancer;dbSUPER;HEDD
HS083-00149chr1:119251040-11925127000--
HS083-00150chr1:120604250-12060696001GeneHancer;dbSUPER
HS083-00151chr1:120610900-12061194001dbSUPER
HS083-00152chr1:121481030-121485650011GeneHancer;dbSUPER
HS083-00153chr1:143467250-14346787000--
HS083-00154chr1:143742660-14374415009--
HS083-00155chr1:144339040-14434038006--
HS083-00156chr1:144529720-14453073005--
HS083-00157chr1:144537500-14454042004dbSUPER
HS083-00158chr1:144860630-14486099000--
HS083-00159chr1:145038060-14503958001GeneHancer;dbSUPER
HS083-00160chr1:145163020-14516452002GeneHancer;dbSUPER
HS083-00161chr1:145209440-14521056001dbSUPER
HS083-00162chr1:145214520-14521709003GeneHancer;dbSUPER
HS083-00163chr1:146326590-14632775000--
HS083-00164chr1:147735060-14773667002--
HS083-00165chr1:147930180-14793156006--
HS083-00166chr1:149222090-149225420015dbSUPER
HS083-00167chr1:149576860-14957760006--
HS083-00168chr1:149577660-14957811000--
HS083-00169chr1:149804620-14980569001dbSUPER
HS083-00170chr1:149810660-14981225003dbSUPER
HS083-00171chr1:150283800-15028392001--
HS083-00172chr1:150294040-15029442001--
HS083-00173chr1:150539670-15054180012dbSUPER
HS083-00174chr1:150715940-15071718000GeneHancer
HS083-00175chr1:151430470-15143162001--
HS083-00176chr1:151484890-15148714005dbSUPER;HEDD
HS083-00177chr1:151512900-15151327000dbSUPER
HS083-00178chr1:151811920-15181267000GeneHancer;dbSUPER
HS083-00179chr1:151960330-15196622008dbSUPER;HEDD
HS083-00180chr1:153755740-15375669011GeneHancer;dbSUPER
HS083-00181chr1:153967030-15396729002--
HS083-00182chr1:154245250-15424542000--
HS083-00183chr1:154975420-154977560013dbSUPER;HEDD
HS083-00184chr1:155100550-15510282005dbSUPER;HEDD
HS083-00185chr1:155108470-15510877002dbSUPER
HS083-00186chr1:156087000-15608878013dbSUPER
HS083-00187chr1:156182970-15618359002dbSUPER
HS083-00188chr1:156307580-15630794000--
HS083-00189chr1:156561780-15656189002--
HS083-00190chr1:156562000-15656212000--
HS083-00191chr1:156661020-15666489008GeneHancer;dbSUPER;HEDD
HS083-00192chr1:156710210-15671080000dbSUPER
HS083-00193chr1:159650650-15965086000--
HS083-00194chr1:160231670-16023190000dbSUPER
HS083-00195chr1:160983150-16098450000dbSUPER
HS083-00196chr1:161052080-16105456008dbSUPER;HEDD
HS083-00197chr1:161123910-16112424000dbSUPER
HS083-00198chr1:161359320-16136047005GeneHancer;dbSUPER;HEDD
HS083-00199chr1:161509250-16151030000GeneHancer;dbSUPER
HS083-00200chr1:165130550-16513303000GeneHancer
HS083-00201chr1:167190200-16719035000--
HS083-00202chr1:167631000-16763494006GeneHancer;dbSUPER;HEDD
HS083-00203chr1:168435490-16843654002GeneHancer
HS083-00204chr1:168995000-16899530000--
HS083-00205chr1:169859830-16986292003dbSUPER;HEDD
HS083-00206chr1:171186290-17119040007GeneHancer
HS083-00207chr1:174969330-17496954000dbSUPER
HS083-00208chr1:177118390-17711880000--
HS083-00209chr1:178995230-17899617003dbSUPER
HS083-00210chr1:180136560-18013756000GeneHancer;dbSUPER
HS083-00211chr1:180553960-18055671001GeneHancer;HEDD
HS083-00212chr1:180990750-18099177000--
HS083-00213chr1:181068380-18106897001GeneHancer;dbSUPER
HS083-00214chr1:182069760-18207186002GeneHancer;dbSUPER
HS083-00215chr1:183774460-18377489000dbSUPER
HS083-00216chr1:184723160-18472362000--
HS083-00217chr1:189531460-18953182000--
HS083-00218chr1:190277400-19027761001--
HS083-00219chr1:191971610-19197232000--
HS083-00220chr1:192594020-19259423000dbSUPER
HS083-00221chr1:193073520-19307439000--
HS083-00222chr1:193130960-19313150000--
HS083-00223chr1:194450680-19445105000--
HS083-00224chr1:197872040-19787235002--
HS083-00225chr1:198126410-19812666001dbSUPER
HS083-00226chr1:199447610-19944812000--
HS083-00227chr1:200638750-20063889001dbSUPER
HS083-00228chr1:200875090-20087696011GeneHancer;dbSUPER
HS083-00229chr1:200877020-20087785010GeneHancer;dbSUPER
HS083-00230chr1:201986320-20198917009dbSUPER;HEDD
HS083-00231chr1:201998470-20199941001GeneHancer;dbSUPER
HS083-00232chr1:202014730-20201747006GeneHancer;dbSUPER;HEDD
HS083-00233chr1:202024940-20202822001GeneHancer;dbSUPER;HEDD
HS083-00234chr1:202053610-20205699015GeneHancer;dbSUPER;HEDD
HS083-00235chr1:202081740-20208202000GeneHancer;dbSUPER
HS083-00236chr1:202310730-20231102000--
HS083-00237chr1:202557700-20255938000GeneHancer;dbSUPER
HS083-00238chr1:204042840-20404452002dbSUPER
HS083-00239chr1:205253860-20525481002GeneHancer;dbSUPER;HEDD
HS083-00240chr1:205512200-20551331002GeneHancer;dbSUPER
HS083-00241chr1:205717660-20571908012dbSUPER
HS083-00242chr1:207198410-20720083002dbSUPER;HEDD
HS083-00243chr1:208357840-20835896000GeneHancer;dbSUPER
HS083-00244chr1:208380600-20838362004GeneHancer;dbSUPER
HS083-00245chr1:208391810-208395290010GeneHancer;dbSUPER
HS083-00246chr1:209555710-20956000001GeneHancer;dbSUPER;HEDD
HS083-00247chr1:209569970-20957213003GeneHancer;dbSUPER
HS083-00248chr1:209572230-20957345003GeneHancer;dbSUPER
HS083-00249chr1:209576710-20958028004GeneHancer;dbSUPER;HEDD
HS083-00250chr1:209582520-209586750012GeneHancer;dbSUPER;HEDD
HS083-00251chr1:209989520-20999085004GeneHancer;dbSUPER;HEDD
HS083-00252chr1:210502830-21050313000--
HS083-00253chr1:211556270-21155707001dbSUPER
HS083-00254chr1:211907830-21190999004GeneHancer;dbSUPER
HS083-00255chr1:212587680-21258806000dbSUPER
HS083-00256chr1:218877800-21888123002GeneHancer
HS083-00257chr1:220133560-22013446001--
HS083-00258chr1:220219360-22021968000--
HS083-00259chr1:223892660-22389512004GeneHancer;dbSUPER;HEDD
HS083-00260chr1:224124650-22412526000--
HS083-00261chr1:224180070-22418148001--
HS083-00262chr1:225954200-22595551001GeneHancer;dbSUPER
HS083-00263chr1:226062600-22606433001dbSUPER;HEDD
HS083-00264chr1:226069500-22607000000dbSUPER
HS083-00265chr1:226250510-22625139000dbSUPER
HS083-00266chr1:226701220-22670142002--
HS083-00267chr1:226951120-22695142000GeneHancer
HS083-00268chr1:227002360-22700349005GeneHancer;dbSUPER;HEDD
HS083-00269chr1:227751430-22775240004--
HS083-00270chr1:228744070-228756240011--
HS083-00271chr1:228756310-22876301009--
HS083-00272chr1:228763070-22877039008--
HS083-00273chr1:229477570-22947784000--
HS083-00274chr1:229478260-22947843004--
HS083-00275chr1:230778420-23077873000--
HS083-00276chr1:230887610-23088896006GeneHancer;dbSUPER;HEDD
HS083-00277chr1:232396370-23239730001--
HS083-00278chr1:233750270-23375039002dbSUPER
HS083-00279chr1:234492430-23449298005--
HS083-00280chr1:234630160-23463169005GeneHancer;dbSUPER
HS083-00281chr1:234666930-23466727001GeneHancer;dbSUPER
HS083-00282chr1:234734420-23473714027dbSUPER
HS083-00283chr1:234791980-234795760012GeneHancer;dbSUPER
HS083-00284chr1:234861430-23486352005GeneHancer;dbSUPER
HS083-00285chr1:234881280-23488336000GeneHancer;dbSUPER
HS083-00286chr1:235010080-23501292004GeneHancer;dbSUPER;HEDD
HS083-00287chr1:235095660-23509951007GeneHancer;dbSUPER;HEDD
HS083-00288chr1:235132130-235135110010GeneHancer;dbSUPER
HS083-00289chr1:235242200-23524379008HEDD
HS083-00290chr1:235324380-23532448000--
HS083-00291chr1:235667130-23566744000dbSUPER
HS083-00292chr1:236071620-23607299002GeneHancer;dbSUPER
HS083-00293chr1:236665440-236667300020GeneHancer;dbSUPER
HS083-00294chr1:238665670-23866588000--
HS083-00295chr1:244466120-24446837004GeneHancer;dbSUPER;HEDD
HS083-00296chr1:244614450-24461493001dbSUPER
HS083-00297chr1:244999060-24499984000dbSUPER
HS083-00298chr1:245026030-24502691002dbSUPER
HS083-00299chr1:249132750-24913385001--