EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS083-00054

Organism

Homo sapiens

Tissue/cell

HCC1954

Coordinate

chr1:27692010-27692740

Target genes

Number: 10
Name	Ensembl ID

RP11	ENSG00000214973
WDTC1	ENSG00000142784
TMEM222	ENSG00000186501
SYTL1	ENSG00000142765
MAP3K6	ENSG00000142733
FCN3	ENSG00000142748
CD164L2	ENSG00000174950
GPR3	ENSG00000181773
WASF2	ENSG00000158195
AHDC1	ENSG00000126705

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:27692118-27692129	CTTTCCCGCCC	-	6.32
KLF16	MA0741.1	chr1:27692726-27692737	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:27692099-27692109	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692425-27692435	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692726-27692736	GCCCCGCCCC	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_34417

chr1:27690765-27694847

HCT-116

Enhancer Sequence

GGACTCTAGC ATAAGCAAGT AAGTATGGGG GCCGAGCATC CGGGCTGGCT GGAGGGAGGA 60
GTGACTCGCG GGGGAATAGC CTCCTTCTGG CCCCGCCCCT GAGCCATCCT TTCCCGCCCA 120
CTTCCCCGCC CCTTCCCCGC CCATTCTTTC TGGGCCGCTG AGGCCACTTA ACCTAAGCTC 180
CCTCACCCAG TATCCAGTCC CGTCGGGCCC CTTCGCTTCT CTTTTTGCCT CTCCTAGCCC 240
GATCCTTGGA AATAGTATGC TAGGACTCCT GAACTCCAGC CTCCCGGCCC CTTTCCCTAA 300
GTCCAAGCTC CTCTCCCAGT AATTGTCCTC AAGAGATCCG CGTGACATTC TCCTGAGGGT 360
GAGGCTGAGT TCTCCAACCC CACCCCTGAG ACACCACAGC CCCGCGCCGC TCCCCGCCCC 420
GCCCCAGAGT TCCAAAGCCC CTCCCCATCC TTGCCCCGCT GGCTGGGCAC CGCTCCGACT 480
GAAGGGTGCC TAAGCCCCAA CCTCGAGCCC TAGAGCCGCG CCCGGATCCC TGTCTCGTCC 540
CGAGCCCGGC CGCGCCCCAG ATCCCCTAAA TCCCACTTTT TTCACGGCCC TGTCCCAAGC 600
CCTTCAGCTT TAGCTCACTT TAAGTCCCCT AGACCCGGTA CCCCTCTCGG CCCCTCCCTT 660
GAGCCTTCGA GCCCGGCTTG GTCCCCTCCC AGGACCCTGA GTCCCGCCCG GATCCGGCCC 720
CGCCCCCAGC 730