Tag | Content |
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EnhancerAtlas ID | HS197-00473 |
Organism | Homo sapiens |
Tissue/cell | ZR75-30 |
Coordinate | chr1:28837400-28839740 |
Target genes | Number: 16 | Name | Ensembl ID |
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SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFAT5 | MA0606.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | ONECUT3 | MA0757.1 | chr1:28839008-28839022 | TTTATTGATTTGTT | - | 6.12 | Zfx | MA0146.2 | chr1:28839528-28839542 | CCCGCCTCGGCCTC | + | 6.01 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_13857 | chr1:28831352-28838041 | CD34_Primary_RO01536 | SE_15100 | chr1:28831392-28838103 | CD4_Memory_Primary_7pool | SE_15100 | chr1:28838463-28839315 | CD4_Memory_Primary_7pool | SE_21360 | chr1:28831370-28837817 | CD8_Memory_7pool | SE_34487 | chr1:28831462-28837999 | HCT-116 | SE_34487 | chr1:28838278-28839281 | HCT-116 | SE_35630 | chr1:28831533-28837920 | HepG2 | SE_39972 | chr1:28831732-28838143 | K562 | SE_39972 | chr1:28838460-28839139 | K562 | SE_65238 | chr1:28831521-28838064 | NHEK | SE_68319 | chr1:28831355-28846288 | TC32 | SE_68320 | chr1:28831355-28846288 | TC32 | SE_68321 | chr1:28831355-28846288 | TC32 | SE_68525 | chr1:28831484-28846339 | TC71 | SE_68526 | chr1:28831484-28846339 | TC71 | SE_68527 | chr1:28831484-28846339 | TC71 | SE_69103 | chr1:28831754-28837755 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 28839408 | 28839498 | chr1 | 28838068 | 28838382 | chr1 | 28838426 | 28838985 |
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| Number: 3 | ID | Chromosome | Start | End |
GH01I028512 | chr1 | 28838101 | 28838290 | GH01I028511 | chr1 | 28838361 | 28839361 | GH01I028513 | chr1 | 28839585 | 28840471 |
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Enhancer Sequence | TGAACCAGTG GTTTTAGTAT GTTTTCAATC CATATACTCA GGTGGGTTTG GGTAACTGCA 60 GTGCTGGGCA GGAAATGAAT GAATTTCTAT TGACTTGCAA GGTAGAGGTG AAGCAAAGCT 120 GTCAGTAGGT GTTCAGGTCC CACTCTGCTA AACTTCAGCT TGCAATACCC CTTTTTTAGA 180 CTTTCCAAAC AGGCACTTCT GGCCTTGTTC TTTGTGTAGG CAGACAGTAT TGGTTGCCTA 240 TCTTAGGAGT ACTAGACTGG GTTTGAATCC TGATCCCACC ACTTGCTGTT CATGAGACTT 300 TGGGTGAGTT ACTCAGCCCC TCTGCCTCAA TTTCATGTTC ACAAAATAAG TGATAAACTA 360 CCTCATAGAG TTGTAATAAG GACAAAGGAG TTGGTATTTG TGAAAAGATT CTTAGGGTCT 420 CTAGATGGAG TGCAGCAGCA TGATCACTTA TTAAATAACA TTCTTTTGTG ACTTCTCAGA 480 AACCAAGGAT ACAGTATCCA ATTTTTTGTT TTTTGTTTTT TTTTTTTTTT GAGAGGGAGT 540 CTCGCTCTGT CGCCCAGGCT GGAGTGCAGT GGCACAATCT CAGCTCACTG CAAGCTCAGC 600 CTCCCCAGCA GCTGGGACTA CAGGTGCACG CCGCCACACC CGGCTAATTT TTTTGTATTT 660 TTAGTAGAGA AGGGGTTTCA CCATGTTAGC CAGGAAGGTC TCCATCTCCT GACCTCGTGA 720 TCCGCCCACC TCGGCCTCCC AAAGTGCTGG GTTTACAGGC GTCAGCCACC ATGCCCAGCT 780 TTTTTTTTTT TGAGATCTAA TCTCACTCTG TCTCCAGGAG GGAGTGCAAT GGAGCCATCT 840 TGGCTTGCTG CAACCTCCAC CTCCCGGGTT CCAGCAATTC TCCCACCTCA GCCTCCCAAG 900 TAGCTGGGAT TACAGGCGCA CGCCACCATG CCCGGCTAAT TTTTTTTGCA TTTTTTAGTA 960 GAGACGGGTT TCACCATGTT AGCCAGGCTG GTCTCGAACT CCTGACCTCA AGTGATCCAC 1020 CTGCCTCAGC ATCCCAAAGT GTTGGGATTA CAGGCGTAAG CCACTGCGCC TAGCCTCAAG 1080 CCTGATCCTT TTTTTTTTTT TTTTTTTTGA GATGGAGTCT TTGCCTCCCA GGCTGGAGTG 1140 CAGTGGCGTG ATCTCAGCTC ACTGCTACCT CTGCTTCCTG GGTTCAAGCG ATTCTCCTGC 1200 CTCAACCTCC CAAGTAGCTG GGATTACAAG CGCCTGCACC GCACCCGGCT AATTTTTGTG 1260 TTTTTTTTTT CAGTAGAGAC AGGGTTTCGC CATGTTGGCC AGGCTGGTCT CAAAACTCCT 1320 GACCTCAGGT GATCCACCAC GCCCGGCAGA GCCTTGATCT CTTAACCACT ATCCTCACCT 1380 CCCCTTTCCC TAAGGATCCA CAATGGCCTC ACTGGCTCTT GAAGGCAGGC TGGCACCTTG 1440 ATCATTCTTC CTGGTCATTA GTATTCTGAT CTGGTTATTT TCCATTTTAT GTCCATCTAA 1500 CCTACTTGGA GGATCCTCAA GAGACTGCAT ATGTAAACTC AGTACTTATT CTTGTACTGT 1560 GCCTGCCATA TAGCAAGCAC TGGCTGATTT AATTTTTCTG TGTTCTTTTT TATTGATTTG 1620 TTTTTATCTT TATTATTTTC TTTGCTTATT TTGGGGTTAG TTTGCTCATC TATTCCTAGT 1680 TTCTTAAGCT AGTAGCTGAG CTCATTGATT GGAGACCTTT CTTTTTTTCT AATGTAGGCA 1740 TTTAGTGCTA TAAATTTCCT CCAGATACTG TTAACAACAC ACAAATTCTG GTATGTTTTG 1800 TTTTCATTTT AATTCATTTC AAAATATTTT TGAGTTCCTT TTCTATTCTT TGATCTATGG 1860 GCTACTTGAA AGTGTATTAT TGTTGTTGTA TTAGTGTTGT TCAAATCTAT CCTTGCTAGT 1920 TTCTTTTTTT TTGGAGACTG CGTCTCCAAA GGCTGGAGTG CAGTGGCACA ATCTTGGCTC 1980 ACTGCAAGCT CCGCCTCCTG GGTTCACACC ATTCTCCTGC CTCAGCGTCC CCAGCAGCTG 2040 GGACTACAGG TGCCTGCCAC CATGCCCTGC TAATTTTTTG TAGAGATGGG GTTTCACCAT 2100 GGTCTCAATC TCCTGACCTT GTGATCCACC CGCCTCGGCC TCCCAAAGTG CTGGGATTAC 2160 AGGTGTGAGC CACCGCGCCC AGCCTCTTTT TTTTTTTTAG ACAAGAGTCT CACTCTGTTG 2220 CCAAAGCCAG AGTGCAGTGG CACAATCTCA GCTCACTGCA ACTTCTGCCT CCGGAGTAGC 2280 TGGAATTACA GTCACGCACC ACCACGCCCA GCTAATTTTT TTGTATTTTT AGTAGAGATG 2340
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