| Tag | Content |
|---|
EnhancerAtlas ID | HS195-00427 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:155108470-155108770 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SP1 | MA0079.4 | chr1:155108662-155108677 | AGGGGGCGGGGTCTG | - | 6.36 | | SP4 | MA0685.1 | chr1:155108660-155108677 | AGAGGGGGCGGGGTCTG | - | 6.69 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_06471 | chr1:155105465-155110736 | Brain_Hippocampus_Middle | | SE_23168 | chr1:155105627-155109010 | Colon_Crypt_1 | | SE_23913 | chr1:155105965-155108993 | Colon_Crypt_2 | | SE_25038 | chr1:155105867-155109024 | Colon_Crypt_3 | | SE_26314 | chr1:155105626-155110559 | Duodenum_Smooth_Muscle | | SE_26817 | chr1:155105592-155109033 | Esophagus | | SE_27749 | chr1:155105346-155110099 | Fetal_Intestine | | SE_28639 | chr1:155105295-155110091 | Fetal_Intestine_Large | | SE_31531 | chr1:155105582-155109033 | Gastric | | SE_34608 | chr1:155105590-155110666 | HCT-116 | | SE_35043 | chr1:155105494-155110098 | HeLa | | SE_36485 | chr1:155106132-155110100 | HMEC | | SE_40872 | chr1:155104867-155110927 | Left_Ventricle | | SE_42320 | chr1:155104890-155110776 | Lung | | SE_49199 | chr1:155105616-155109049 | Right_Atrium | | SE_49607 | chr1:155105902-155108993 | Right_Ventricle | | SE_50340 | chr1:155105563-155110973 | Sigmoid_Colon | | SE_52513 | chr1:155105570-155109049 | Small_Intestine | | SE_57550 | chr1:155108335-155109005 | VACO_503 | | SE_65444 | chr1:155105907-155109966 | Pancreatic_islets |
|
Enhancer Sequence | AGAGTGCGGC CGGGCTGGGT TGGGGAGGAC TAGGCAGTCA GGAAAGGAGA GAGAGGGGAC 60
AGAGACGTGG CCACAGCACC TGGCTCGTCC GGAACCGGGA TCAAAGTGGG ATCGGGTCGA 120
GGGGACCGGG GTACAAGGGC GAGGCTGGTC ACTAGGCCTG AAGGAGAAGG CAGGATAGCT 180
GGCGGGGGGG AGAGGGGGCG GGGTCTGCGG TGGTCCGGAA AGGATGACAG GCATTGGGCA 240
TCCCCCTCTA GCACTCTGCT TCTCCCTTCC CACCCCCACC CCTCCCTTCG GGGCCCCATT 300
|
