Tag | Content |
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EnhancerAtlas ID | HS195-00290 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:94049680-94051420 |
SNPs | Number: 3 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Gfi1b | MA0483.1 | chr1:94050147-94050158 | AAATCTCAGCA | + | 6.32 | KLF4 | MA0039.3 | chr1:94050705-94050716 | GCAGGGTGTGG | - | 6.62 | Mecom | MA0029.1 | chr1:94050605-94050619 | AAGATAAGACAAGA | + | 6.59 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_00285 | chr1:94048823-94052046 | Adipose_Nuclei | SE_24467 | chr1:94047354-94051276 | Colon_Crypt_2 | SE_29507 | chr1:94046603-94051815 | Fetal_Intestine_Large | SE_30459 | chr1:94049165-94051088 | Fetal_Muscle | SE_31653 | chr1:94046979-94051493 | Gastric | SE_36105 | chr1:94049690-94051592 | HMEC | SE_45907 | chr1:94049048-94051466 | Osteoblasts | SE_50800 | chr1:94047141-94051486 | Sigmoid_Colon | SE_51412 | chr1:94049076-94051461 | Skeletal_Muscle | SE_57128 | chr1:94050005-94050630 | VACO_400 | SE_57128 | chr1:94050911-94051327 | VACO_400 | SE_65777 | chr1:94049616-94050970 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 94050231 | 94051222 | chr1 | 94050618 | 94051200 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I093578 | chr1 | 94043818 | 94052134 |
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Enhancer Sequence | GAAGTAAAAG ACACATAGGA TGGAAATGTG TTACTAACGT GTAAAATAAA ACTTTTAGGC 60 AATGCCATGG GAACTTAAAC AAAAACAAAA AAAAAGAAAA CTGCTCAGAA CGAGAGTGCT 120 ACAGCATACC CTAAAAGTAA AGGAATGACC GCTGGAGAAA CAAATTACTG ATGGGACGAT 180 TAATATATGA CTGTGTTGTG TACTCCATCC CCCTGTCCCC ATGACCAATG CAGCAGCTGA 240 GTCCTAGGAT GCCTCCTCTG GGCTGTTCCA TCCTGTTGAA CAGAGTAGGG TAAAAGTTTT 300 ACGATACTCC CGGGAAAATC TGATGAACTG GAATGTGTAC TTTTAACAGA GCCTAAAATT 360 ACTTACAGGC CCAGAGGGAA TGGCTTGCCT AACTAACATG CATTTTCCAC ATGCTCCATA 420 GTGTTGCAGT TAGGAAGGAA GCTGTGGGGA AACTTCCATT TTGGTGCAAA TCTCAGCATC 480 CCCCAAATAA CCTGCAGGAC TGCCTGGGGA GGCTGCCATC CCCAACCTCC TGGCTGCTCT 540 CGGGGGACCC CCACACAGCC TCCTCCTGCT GAGCTGGGAA AAGGCACCGG CACGGTCACC 600 AAGCAGCAGT TGGGAGGCAC ACTGTGTAAC CACACAAGGA AAAGGTGGAA GGTAACTTTC 660 AACACACTCG CTGTTATTCC TTCTGTCCCT TTCCAATTCA GACTGGGAAT TTCTCCAGCA 720 CCAAGCACCA GAATCTCCCT AGCTAGAGAC AGAGGCACTG CACCAGCCAA GTTGTTATGA 780 ACTTTAATTG GCCTTCCCAT AAGCATAAAA CATTGTTATG TTACAGAAAT CACGAAGTTC 840 TTTCCTACCT TTACAAGCAC CAAAGAAAAA ACAAATCAAA AAACCCCCAA ACTCCAAGGA 900 ACAGAGAAAT TCCAGCAACC TTTCGAAGAT AAGACAAGAC CGAGGGCAAA TTACAAAAGG 960 AAATATCTCC CGAGAAGTGA TATTTAAGCA GTGACCACTG CGGCTGGACT CCAGGGGCCA 1020 GAACGGCAGG GTGTGGAATG CAACCTGCCT GTGAGCACAC ACCTTCGCCC AGGGCAGGCC 1080 ACCAGCCAGC CAACTAGCAG GCCCGACGTC AGGGCAGGTG GCACCTGGCC AGAGCTGCAT 1140 AAGGGAGCCA CTGAAGGACA CTGGGGCAGG GCAGCAGGCC ATGAGCCATC TTTTCCCCTC 1200 CTCCCACTTA AACATTTCTG GGCGTGCTGC GTGTACAAAG TGGTGACAAG TTCTAGGAGG 1260 ATCTGCATTC CAAAGGGCAA ACAGAAAAGT GGCTCTATTA GGCCTGACTT GTTGACTTAA 1320 GAGACTTAGT CTTTTTTTCA TTTCTTATCT TAAAAAGTTT TTAAACCAGG ATCATTCAGG 1380 GCCAACTAGG AGGCCTTCCC TGCAGCAGTG GTTCTGTTAT CCTGCCGAAT ACACTCCCAC 1440 TCTGTGCATG ACATTAATTC CCTGCTTCGA CCATTCAGCA GCCTATCCTT CCCAAAGGAA 1500 ACAGAAGAAA AGGTACCCCT TCTAACACTG TAAGGCATCT CAAGTCCAAT CCTATTACTA 1560 TGAAAAGGAG GATTTCTAAA TATCAGGTCT TGCCTCCCTC CTTGCAATTG CCCTGAGTTT 1620 TTTTGTTTGT TTTGAGACAG GCTCTCGCTC TGTTGCCCAG GCTGGAGTGA AGTGGCATGG 1680 TCATGGCTCA CTGCAGCTTC AACCTCCCAG GCTCAAGCAA TCCTCCCACC TCAGCCTCTC 1740
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