Tag | Content |
---|
EnhancerAtlas ID | HS195-00124 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:21958180-21960110 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr1:21959665-21959686 | GGGGCTGTCCTGGGTGGTGGG | - | 6.01 | ZNF263 | MA0528.1 | chr1:21959781-21959802 | TCCCCTTTCCTGTCCTGCCCC | - | 6 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_00987 | chr1:21958132-21962444 | Adrenal_Gland | SE_06618 | chr1:21957293-21958937 | Brain_Hippocampus_Middle | SE_06618 | chr1:21959178-21962350 | Brain_Hippocampus_Middle | SE_31655 | chr1:21958187-21962985 | Gastric | SE_40199 | chr1:21957048-21960980 | K562 | SE_41934 | chr1:21958270-21959266 | LNCaP | SE_41934 | chr1:21959294-21962519 | LNCaP | SE_47603 | chr1:21958212-21958871 | Pancreas | SE_47603 | chr1:21958919-21959353 | Pancreas | SE_47603 | chr1:21959649-21962274 | Pancreas | SE_65280 | chr1:21957057-21962671 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I021630 | chr1 | 21956627 | 21962244 |
|
Enhancer Sequence | AAAAACAAAA ACAAAAACAA AAAACAAAAA AGAAATCCAG ATGAGATATA AACCTTTTTT 60 CCAGATGAGA AAACTGAGGC TCAGAGAGGT TCAGTGACAA GCCCCAGGTC GCACAATGGG 120 AAAGGGCAGG GCTGAGATGT GACTCCAGTC CAGTGTCCCT TCCACAGCGT GCATCCCACT 180 GTCCTCAGCC CAGGCCCTCA GTCCCGTCAC CTGGCCTCCT GCCCCATGAC CTCCCATCAC 240 GGCCCTGGCT CCTGCAGCCA CCGCCAAGCG CCTTCCCTAG GCCCAGCTCC GGCTCTGCTC 300 TGTCTGGCCT GGACACCTGC ACGCTGCCTC CTCTGACACA TGAAATGGGA GCAGCCAGAG 360 AGGAGGTGAC CCGCCCAAGG TCACATGGAA AGCTGGAGCC AACCTGGAGT CTGGGCCAGG 420 CACATTCCGG GGTCACCTTC AGCCCCTGTG TCTGTGTGGC AGCTATCTCT CCCTCTCGGG 480 GAGAGCACCC ATCTTTTCCA GGGAAAGGGT GAAGCAAGGG TGTGGGGGAA GGGCCCAGCT 540 CCTAAGTGGG ATGGGCCCGG CCGGAAGCCG CTGCTGACAG CTCCCCGGTT TCTTGGCAAC 600 TGTCACTGCA CCTCCTCCCC CTCCCTTATC TCTGCATCGA GGTAACAATA ATAATCGCAC 660 CATCGTGAGT GCAGTTCTTT GTACTTTTCA AAAGCCTTCT TTATCTGCTC ACTCCTGGGA 720 CTCTCACCGG AACTGGAATG GAGATAAGGC AGTCACTAGG ATCCCCAATT GCCAGCAGGG 780 CAAACTGAGG CTTGGAGAGG TGAAAACACG ACCTCAAAGT CAGCCAATAA GGCCGTGAGC 840 AGCAGATCAG GGATAAGAAC ACAGGCCTTC CACCAGTCCA GGGTGGGAAG ATCTCAAGAG 900 AGTTCCATAC TCTGCAAAAC AGCAGGGTCA GCCCAGGCTC AGTGGTTCAT GTCTGTAATC 960 CCAGCACTTT GGTAGGCTGA GGTGGGAGGA ACACTTGAAG CCAGGGGTTC GAGACCAGCC 1020 TGGGCAGCAA AGTGAGCCCT CATCTTTACA AAAAAATTAA AAACCCAGCC CACTGCAGTG 1080 GCTCACACCT ATAGTCTCAG GCACTCAGGA GGCTGAGGTG GGAGGATCAC TTGAGCCAGA 1140 AGTTCCAGGC TACAGTGAGC CATGATGGTA CCACTGCATT CCAGCCCTGG CGACAGAGCA 1200 AGACCCCATC TATACAATGG AAACAGACCA ACAAAACATC AGGGTCAGAC TCAGGAATGG 1260 TTGGGCAGAG GGGGAGACCA AGCACAGGTG GCCAGATGCC TTCCTAGGGT GATTCTCAAC 1320 TGTTAACCAG CTGGAGGGGT GGTGAGAGGG TCCTGTCTTT TTCTCTCATC TGCAAAATGA 1380 GAGATAATGT ACCCACCTCA TAGAGTTGCT ATAAAGTGCT TGTAATTATT ATTACTGGCC 1440 ACTCTCCTGG AGAGCCCAAC CTTTTCAGGG CACCAGAAGT GTGGTGGGGC TGTCCTGGGT 1500 GGTGGGCTTG GCCCTTTGGC CCCCCGGAGA TAGCTGCCCT GGATGGTGGT CTCCCAGTGG 1560 GTCCAGCCCC TGCTGACTCC CTCCAGCCTC AACCTCATAC CTCCCCTTTC CTGTCCTGCC 1620 CCAGCCGCCT GTCCTGGCTC TGTCCTAACC TCCCCAGGCT GCAGGCAGCT TTCCTAACCA 1680 GCCACACTGT TCACAGGCAC CCCCCCTCTG CTGGGGGTGC CTTCTCCTGC TTTTCTGCCT 1740 AGTGAACCAT TGATGCTTTG AAATTCAACT CAACCAGGTG AAACTCTGGT GGCCAGGGCA 1800 GGTGGTACAG GACCATCAAG GCAAGAAGGC TGGGACCGGG AGCAGGGGAA TGGGGATCTG 1860 GACAGGTGAC AGTGCCTGGA GCAAGAGCAG GAGGAGCCCA CCCTGAGGAC AGCCACCCAC 1920 TGCACACAGG 1930
|