EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS193-01080

Organism

Homo sapiens

Tissue/cell

U87

Coordinate

chr1:46648340-46649860

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:46649391-46649410

TTGCCAGCAGGTGGAACCT

6.1

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_23257	chr1:46648290-46652274	Colon_Crypt_1
SE_24097	chr1:46648311-46650828	Colon_Crypt_2
SE_31897	chr1:46645550-46652335	Gastric
SE_34180	chr1:46645443-46651019	HCC1954
SE_41846	chr1:46645690-46648609	LNCaP
SE_41846	chr1:46648685-46648984	LNCaP
SE_41846	chr1:46649005-46651848	LNCaP
SE_50730	chr1:46644589-46652277	Sigmoid_Colon
SE_65807	chr1:46648144-46650755	Pancreatic_islets

Enhancer Sequence

CACTGCACTC CAGCCTGGGC GACAGAGTTT ATGTATGTAT TGATTAGTTT AGAAGCGTGG 60
GTAGACTCTC TAGTTCTGAT GTGGTCTGTG CCTTGGGCTT CCTTCGGCTG CAGGGAACTT 120
GTGTTTTTGT TGTTGTTGTT GTTGTTGTTT GTTTCTTTGA GACAGGATCT TGCTTTGTCA 180
CCAAAGCTGG AGTGCAGTGG CATGATCATG GCTTACTGCA GCGTCAACCT CCTGGGCTCA 240
AGGGATTCCC CTACCTCACT CAGCCTCCTG AGTATCTAGG ACTACAGGAG TGTGCCACCA 300
TGCTCAGCTA ATTAAAAAAA ATTTTTTTTG TAGAGGCGGT CTCACTATAT TGCCCAGGCT 360
GGTCTCGAAC TCCTGGACTT AAGTGATTCT CCCACCTCTG CCTCCCAAAG TGCGGGGATT 420
ACAGGCATGA GCCACTGTGC CAGTCCTGAA CTAGTCTTTA TCCCTGTATC TGGAGGAAGC 480
AATAGGATTC CAGGGATTTG GACAGGAGAG GCTCTGCCCT GAGAGGGTTA AAGGCAAATC 540
CGGTTTGATT TCTGGCCTCT GTTACCCAGA CCTTGCCAGG CTGGGCAAAG CAGGATAGGG 600
CAGACCTCCA GCTCCATGAA ATTTGACCCT GCAGGCTAGA AGTCCAGCTT TCTGTCCTTG 660
GGCAAACATG CCTGGAATCC AGCCACAATC TGCCACCTCA CTTCCCGTTC TAGCCTCAGT 720
TTTTATAGCT GGCAAGTGAG GACTAGTCAC CAAGGTGGTG TCAGGCTGAT TCATCCACTG 780
AAGCCCTGGG CCGGGAGGCT TTCCTCTAAG ATCTGTGGGA ACTGCGCAGG GCCCTCCTCA 840
ATCTAGGCCT CAGAATTCCC CCTGAGGTTT GGAGTTGAGC TAGACAGCCT TTAAGAGAAG 900
CTCTGGCTGT ATTCCCACTG GTACCTCACT TTCCTCTTGT GAGGCAAGGA GGTCTTGTCT 960
ACATGAGGGG CGGGCCTGAA GTTGGATTCT GGAGGGGAGC CAAATGGGGC CTCAGGTGGG 1020
TGAACCTTCT CAACCTCCTC CCTCTCCAAG GTTGCCAGCA GGTGGAACCT CAGCCTCGCC 1080
TCCATTACTA TGGTGACTAT TGAGCCTGTT CTGCTACCAC CCCCGTCTCC ACCTATCAGA 1140
GGACAGAGGT GTTCTAGGCA CCCATAGCCC AGAAAGGAAA TAGGAGGCTG GGCCCTCACC 1200
TGCCTGTTTT CAATCCTAGC TATGTGGCAG GACCCTGGCA GCAGTGAGGG AAAGTCTTGC 1260
CCCTCTGCCC ACCCTGAGGA TATTTCTAGA ACCCCTGATC TCCTTTATAT CTGCCCAGGT 1320
GTGCAGCCTG GTCCTAGCTA TGCATATCCC AGCTCCCATT TTTCTGGCTC TAGAGGATGT 1380
TTCCCTCCTT ACAGGATGAG GTTTTAGACT CCCTAGCCAA TAAAGAGGGA AGTTTCTCGG 1440
CTCCCATCCT TCTTACTCAG CTGTGTGGTA GTAAGCTACT TGCCAGCACT GTTTAAGGCC 1500
TGCCTGACCT CTCTCTCCCC 1520