| Tag | Content |
|---|
EnhancerAtlas ID | HS192-00324 |
Organism | Homo sapiens |
Tissue/cell | U2OS |
Coordinate | chr1:27719240-27720290 |
Target genes | | Number: 16 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| REST | MA0138.2 | chr1:27720053-27720074 | TGCAGGACCTAGGACAGGGAT | + | 6.72 | | TFAP2A | MA0003.3 | chr1:27719859-27719870 | AGCCTCAGGCA | + | 6.32 | | TFAP2C | MA0524.2 | chr1:27720139-27720151 | AGCCCCAGGGCA | + | 6.11 |
|
| | Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
| SE_06328 | chr1:27717086-27721721 | Brain_Hippocampus_Middle | | SE_48981 | chr1:27717117-27719778 | Right_Atrium |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GGTGAGTAGC GGGCCCCGCC GCGGGCACCA GGGGTCCTGA AGGGCACGCA GGATGCTGGG 60
GCACTGGGCC GGCGGAAGGC TCCTAGTGGC CGGCCGGGGT TCGAGTTCGA GGTGGGAATT 120
CTGGGTTTAG GCGATTCTGG GTTAGCAGGC TTGGGCCCAA GTGCTCGAGT GCTGGGGTTG 180
AGTTGGATGA CCCGGCGAAG GGTAAGCATT CCTGCAGGGA CCCGAGGCCC TGGAGGGACT 240
GATGGTCATC TGAGGTTAAG CCGGCAGGAG GCGTCTGGGG CAGGGACCCA GGGGTCCGAA 300
CAGCAGGAGG TGTCCAATTT AGGAATCCAG GTATCCAGGC AGGAGGCAGA GTCAGGCCCA 360
AAATCCAGGT GTCCGGGCAG AAGGAGGCAT CTGACTCAGG GATCCAGTCT TCCAGCAGGG 420
GGGTCTGCCC AGAGACCTAG AGATTCAGGC GGAAAGAAGG GTCCAGCCAG GAACAGAAGT 480
CTGGGAGGGT GGGGGGTGGG GGGCTGAGTT CCCAGGTGTT ACCGCGGGAG TGCGGGGTGA 540
TGGCTGGCGG GAGCTTCACG CGCATTCCCT GGGGGCGGAG TCTAAGGCTG GCAGTACTGA 600
AAATCGTGAG GGGTCTGGGA GCCTCAGGCA CGAGCTAGCA TCATCATCTC TGATGGGAGG 660
GAGCGGAGCT GCTCAGTCTC CCTGATGGGG TAGATGTTTC CCTACCCCAA TCTTGAGCCT 720
TCGGGGGCAT CCCCTGGATC CTATGGCCCT CTTCCACTTA TAGTACCCCT TCTTCTGTCT 780
CTCCTCTGGT CACACACGTG GGAAAAAGAG ACCTGCAGGA CCTAGGACAG GGATCCCCAG 840
GAAGAGACCC CTGTTTAGAG GCCTGGGGGC ATTGGAGGGG ACAGCGGTAT CCTGGGAAGA 900
GCCCCAGGGC ATGAATGTGG GGATAAGGCA TTGGGACTCT ATCAGGTATC CTGAGGAGAG 960
ACTCCCACCA CGTATCCTGA GAAGCACCTC ACCCCCTCCA GACCCCAACT CCCATCACCC 1020
AGCTTGGTCA GCTTCTCACA AGGCCTTTCT 1050
|
