Tag | Content |
---|
EnhancerAtlas ID | HS192-00133 |
Organism | Homo sapiens |
Tissue/cell | U2OS |
Coordinate | chr1:11112300-11114640 |
Target genes | Number: 10 | Name | Ensembl ID |
|
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ESR1 | MA0112.3 | chr1:11113675-11113692 | AAGGTCAGGGTGGCCTG | + | 6.39 | ESR2 | MA0258.2 | chr1:11113676-11113691 | AGGTCAGGGTGGCCT | + | 6.5 | KLF16 | MA0741.1 | chr1:11114131-11114142 | GGGGGCGGGGC | - | 6.02 | KLF5 | MA0599.1 | chr1:11114132-11114142 | GGGGCGGGGC | - | 6.02 | REST | MA0138.2 | chr1:11114047-11114068 | TTCAGCACCTTGGAGAGGGGA | + | 7.88 | SP2 | MA0516.2 | chr1:11114129-11114146 | TAGGGGGCGGGGCATGG | - | 6.79 | SP4 | MA0685.1 | chr1:11114128-11114145 | ATAGGGGGCGGGGCATG | - | 6.27 | ZNF143 | MA0088.2 | chr1:11114136-11114152 | CGGGGCATGGTGGGAA | - | 6.66 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 11112813 | 11112866 | chr1 | 11114087 | 11114243 | chr1 | 11113165 | 11113800 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I011052 | chr1 | 11113041 | 11113190 | GH01I011053 | chr1 | 11113961 | 11114110 |
|
Enhancer Sequence | TGAATTTGTA CAGCTTCATC TCCAGAGCCC TCCTGATCCT TTCCTGGCAG TCATTGGGTG 60 GGGTGAAAGT CCCAACCCTT CAGTCTTTAG GTCTTACTTA CCAGCCCCAC CCTGAGGCTC 120 CCCCGGGGCT CTACCCTAGA CCACTGCATT AGCATAAACT CGGGAGTTCT CTAACAGAGC 180 ATATAATGAA CGACAAGACA CGCCTACCGA TCAGGAATTT CCAAAGGTGT TAGCGGCTCC 240 GTGACAGGAA CTGGGGACAA ACACCAAATC GATTTCTTCT TCTACTACAG AAGATAAACC 300 CCAAATAATC AGCTCCAAGA GGGAAAGGGG CTGCGGGAGG AGGACTGTGA TTTTTCTTCT 360 GACAAGCCGC ACGGACCCAT GAATCCTTAA GCCAGGGGCC TGGCTAATTA TCATAAATCA 420 AATTTTGAAA AGTCTAGATA GGATTGATGT TATTCCCCAT GCCACACTGG GCCTGTTTGT 480 GGCCCAAAGA TTTCTGGGAC GCTGGGGGAC CCAGGTTGTG TCCTCATCAA GGCTGTTTCT 540 GTTTCAGCAG ATCATCCTGG GCTGCATCGC ACCCACCCAG TCGTGGGGCT CAGGCTTGCC 600 CCCATCCCTG GTGCATGCCT CTTCGCGGCG GCCAGGTGTG TGTATAGACT ATAGGCTGGG 660 GAGGCGCAGG ATCTACGCTG CCGGCAACTT CATCTTCCTG CAGCTGCTTC CCAGATCTCC 720 TGCCTCCCAG ATGGCCCCGG CTGTTTCCAC AACCTGGTCC ACCCTCCCTT CTCTCGGGCC 780 GGCACTGGTT GAGGGCTGCG TCGCACGTGC TTCTCACCAA AGCTTCCTAA CAGGGACGGT 840 GTGCTCCCCC TCTGACATCG GGGTAACCGG CAGAGGGCCT GCGTGGCTGC AGGTCACAGA 900 GCTGAGGGAG GCAGAGTTGA GATTGAGATC TGGACCGATT CCAGAGCCCT TGGGGAAAGG 960 CCCTCACACT TAGGGGGTCA CGGGATCGTC CCTCTAAGGG GGCAGCATTC CCTGCCTGGA 1020 TCTTGGCCAG GGAGTAGATG TCAGAGAGAC CATCCATGCC GGGACCTCCA GAGTGCCTGG 1080 CCTGAGATGC AGGAGACCCT GGGGTGAGCA GGGTGGAGTG GCGTCGGACG GTGGCTGCTG 1140 ATTGGCTGTG TGTCCTTAGG CACATCGCCT TGCCTCTGTG CAGCAGGAAC AATGCCTGGC 1200 GGGCAGGTGG TTGTGAAGGT TAAATGAAAG TGCCTGGCCC ACCCAGCTGC AGCCTGGCCT 1260 GTCAGGCTCC AGAAATAGCC CCTGCCAACC CACCTGAACG CCAGCTGCTC CTCTCGGGCC 1320 TTCCCTGAGA CTATGAAGGC CCGGGGGCAG ACGCCAGCTC CCCAGACTGA TTTGAAAGGT 1380 CAGGGTGGCC TGGAGAAGTT AGCCTGAGGT CAGATCTGCT GATGGGCCAA AGGTCTGAAG 1440 GTGCTCAGTC TGGTGAATTC ACAGGGGTGG GGAGTGGGGG GCAGGTGGAG ACTGGAGGGC 1500 TATGACTGGC CTGAAGCCAG AGTTGATGGC GAAACTGAAT CCCCCTTACT CTGGTGTCCC 1560 AGAAAACATA CCCGGGTGAG TTAGGGCTCC AAGGTGGCTG CCTCGGCTGG GAGTGGGGCC 1620 TCCCTCCCTG ATGCGTCCGC TAGCCCAGCC CCTGCCCAGG GTGGGGAAAG GGGTTGGCAA 1680 CTCAGGCCCA TGCAAAGAGG GTTCCTTTCC TGTCCTCCCA CCACCGTTGG GTCCTGGAAG 1740 GCGGGAGTTC AGCACCTTGG AGAGGGGACA GCCCTGGTCC TCGCAGTCCC TGGTGGGGTG 1800 CCCACACTTG CTTTCTCAAT TTGTCCACAT AGGGGGCGGG GCATGGTGGG AATTTGAACC 1860 CAAGTCTGAA TGCCGGGTGG AGTCAGGGCA CAGTCACTGG GCCAGTGTTA AGCTCCTGAT 1920 GTGCTTAAAA AGGCCGAAGG TAACCAGCCC CGCCACCCCT TCCTGTATTT GCCCTGGAGT 1980 ACCTGGATGG GACCTGACTT ACACCTGTGA GTGTCCCCAA TTTTTCTGAG AATGCTCCCG 2040 GGCAGCCCCA CCCTGATCTC ACCCACCCCA CTGCCCTGGG GGGCTGTCAC CAGTGGCCTT 2100 GTGAAGGGCT TGGTAAAAGG ACAGCTAAGT CAGCTTCCCA GGACAGCTCT GGGTCCCACG 2160 TGACGACTGC GGTGACCCTC TGTGCCCCAG GCTATCCACG ATGGCCCGCC TGCAGCCTCA 2220 GCCCTGCAGC AGACACTTGG GGGTCAGCCA GCAAGGCCTC TGCAGACCCT CACCCCAGAG 2280 GCACCCAATG GTGAATGTGG CCCTGCCTGG GCCCAGCCAA GGTCAGGAGA CACAGGACTC 2340
|