EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS192-00052

Organism

Homo sapiens

Tissue/cell

U2OS

Coordinate

chr1:1655200-1655690

Target genes

Number: 19
Name	Ensembl ID

SDF4	ENSG00000078808
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
RP5	ENSG00000240731
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
AL645728.3	ENSG00000236684
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST

MA0138.2

chr1:1655364-1655385

ACTAGCACACTGGACAGCTGC

6.14

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_14824	chr1:1653733-1657099	CD4_Memory_Primary_7pool
SE_21244	chr1:1654255-1657134	CD8_Memory_7pool
SE_23186	chr1:1654223-1656981	Colon_Crypt_1
SE_23960	chr1:1654817-1656465	Colon_Crypt_2
SE_30279	chr1:1654808-1657454	Fetal_Muscle
SE_52748	chr1:1654127-1657056	Small_Intestine
SE_53825	chr1:1654205-1657234	Spleen

Enhancer Sequence

AGTTCAGTCT TCCGTACAAC CAGAATAACA ACACCTACGT GATAGTATCG ATCGCGGATT 60
AAAGATCATC CGTTTAAAGG CTCTTAACTC AGGACCTGCC ACTCATCAAA CACTGCTTTT 120
ACTGTCAGAA TCTGCTAGAA AGACCGCTTG GACTACGTGA AGCCACTAGC ACACTGGACA 180
GCTGCACCTT GAGACCGGGG AGATGCTCCG AGATGTGCTC GCGAACAAGG CCACCTGACC 240
CGGGCACTGG GCTATTTCCT CGGGTTCAGT CCCGCACACT TGAGGTTCAG CCTGGCAGAC 300
GTTGGCTCCA GACAGCGTTT GGACCCGCCG CCTCCACCAC CCAAAGTTCC GTGCGGGATG 360
AGACTGTCCG CGGAAGCGAG GGTGTCGCTC GCCCCCGGGC CCGGGTCCGC CCCGCTCCGA 420
GGCCTGCTCG GAAGAAAGAC CTCGGTGCGC AGTTCTCGTC GCGCTCCCAC ACCTGGTCCG 480
CCCAGTCGGA 490