EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS191-00985

Organism

Homo sapiens

Tissue/cell

Trophoblast

Coordinate

chr1:42342560-42343090

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:42342650-42342671	CCTGAGTTTCAGTTTCCTTAC	+	6.27
IRF9	MA0653.1	chr1:42342654-42342669	AGTTTCAGTTTCCTT	-	6.9

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_25331	chr1:42325035-42352494	DND41
SE_31241	chr1:42342412-42343256	Fetal_Thymus
SE_39407	chr1:42341350-42343524	Jurkat
SE_44017	chr1:42342111-42343664	MM1S
SE_49913	chr1:42336834-42349775	RPMI-8402
SE_66323	chr1:42341350-42343524	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I041876

chr1

42342241

42343266

Enhancer Sequence

AGCCTGGAAA CAGCAAAAGG AAAACTCAGC ACGTTCTACA GACGTGGGTT CAAAGCCCTG 60
CTCTGTCCTC CCTCCAAGCC CTAAACCCCT CCTGAGTTTC AGTTTCCTTA CTGAAGAAGT 120
GGGAAGGCCA TGTGCATTGA GAGGTTACTG TGGTTTTGAG TCCAGTGAAT ACACACACTG 180
CTAAATCCTA AAACTCTTCT TTCTTTTTTG GTTAATAATA TTAAACTCAT CCAGGAGAAT 240
ACCTTAATTT AAGACTCCAG GCAGAATTCT CCTTTCCCCA AGCTCTGCCA ACACCCAAAC 300
CCCTCCCCAG AAGACAGCCT GGTTCACACA ACAGAGGAAC AGACCCCTCA CGACTCTGCA 360
GGGGGAATTC CTTTCTGGGA GAGAACACAT GTCCAATAGG GCCAGTCCCC ACTCAGGCTG 420
CTGCTGTCAC TCAGCCAGAA GGCAGGACAG GCTTTTGAAG CTGTGATATT TCTGAGTTTG 480
GTTTTGGACA AAAACACCAT TCTTCCTCAT AGCCTTTCAC ACCCTGATTC 530