EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS191-00493

Organism

Homo sapiens

Tissue/cell

Trophoblast

Coordinate

chr1:22249890-22252360

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263

MA0528.1

chr1:22250203-22250224

CCTCCTTCTCCCTACTCCTTT

6.12

dbSUPER

Number of super-enhancer constituents: 29
ID	Coordinate	Tissue/cell

SE_00032	chr1:22219419-22267496	Adipose_Nuclei
SE_00908	chr1:22249840-22253211	Adrenal_Gland
SE_01556	chr1:22249801-22255066	Aorta
SE_06476	chr1:22249916-22255033	Brain_Hippocampus_Middle
SE_23160	chr1:22250463-22252380	Colon_Crypt_1
SE_23793	chr1:22250483-22252365	Colon_Crypt_2
SE_25801	chr1:22244967-22255239	Duodenum_Smooth_Muscle
SE_26605	chr1:22249864-22255081	Esophagus
SE_28012	chr1:22246575-22255380	Fetal_Intestine
SE_28954	chr1:22245252-22259468	Fetal_Intestine_Large
SE_29681	chr1:22249811-22252337	Fetal_Muscle
SE_36920	chr1:22219607-22267740	HSMMtube
SE_37945	chr1:22220303-22255266	HUVEC
SE_39947	chr1:22249907-22252119	K562
SE_40620	chr1:22245016-22267401	Left_Ventricle
SE_42167	chr1:22245892-22255112	Lung
SE_44366	chr1:22249824-22255737	NHDF-Ad
SE_45699	chr1:22249760-22255260	Osteoblasts
SE_47433	chr1:22245282-22255216	Panc1
SE_48478	chr1:22249891-22255102	Psoas_Muscle
SE_48565	chr1:22249797-22252389	Right_Atrium
SE_49456	chr1:22249862-22251141	Right_Ventricle
SE_49456	chr1:22251347-22252357	Right_Ventricle
SE_50206	chr1:22249841-22252468	Sigmoid_Colon
SE_51733	chr1:22249921-22252458	Skeletal_Muscle_Myoblast
SE_52462	chr1:22249821-22261125	Small_Intestine
SE_53700	chr1:22249792-22252468	Spleen
SE_54522	chr1:22243934-22263810	Stomach_Smooth_Muscle
SE_63519	chr1:22249921-22252458	HSMM

Enhancer Sequence

TCCGTCTCAA AAAAAAAAAT AAAATAAAAT AACCAGACTC AACATAAATA GCCCTCGCTA 60
TTTTGCACAT CCATGAGCTC ATCTGAGACT CACGATAAAA TCGGCCTGCC CTTCTCTCTG 120
CTGCTGTGGG CCCTCCCCCT GCCCTCACCC AGGGGAGCTG GCTCCCAGGT CCTCTCCTCC 180
CACAGGCTCA CTGCAAGGGA AACAGACTCA CAAATGAGTG CTGAGACCAA GTCACAAAGA 240
CTCAAGAGAT CTCCCAGAGG TCTGGTGGCC CTGAAATCCT GCTATAGTCC TCGAGTGTCT 300
TCCTTGAATG TAGCCTCCTT CTCCCTACTC CTTTACCAGC TGGCCCACCA CTCAGCCTCT 360
CTCCCCTATC AGACCACAAG CTCCATAAGC CCACGGTGGT GTTTAGATCC AACACAAGGC 420
CTCGCATACC GCTGTCACTC CGAGAATGTT TGCCGAATGA ATGAACGGTC CCATTTTGCT 480
TCTGGGGAAA ATTAAGCTCA AAGAAGTTCA ATGGCTTGGG ATCACGTAAG AGTTTAGGAA 540
TCTTGTGACT CCTAGTCACA CTTTCTAAAC AGACATTTAC AATGAATGCC CCTGATGTCA 600
GCTTAGCAGC AGGTACCCAA GAGCAGAGGT GAACTGACAT GGACAGAGCA CGGCAGGAGA 660
GATTCTGGGG CTACACAAGA AGACAGGACA GGCTTCAAGG TCTAGGGCAC AGGGGCCATC 720
TCCTTCATCT GCTTCCCTAG CCCAGAGCCT GGCACTTGGG AGCTGGGGTT ATGCCTCCAT 780
TTCCCAGATG AGAAGTAGCT CATGGAGCAG GGAATAGCCA GGCGCAGAGG AAGGTGGAAG 840
CTGCCTCCAG CGTCACCAGA CATCCTGGAA GAAATTGGAG GCATGGTCCC TACTCTCCGG 900
ATGCCTTGGA TCTTGTTGGA GAGGCAGGAC TCGTAAGCTA TAAGTGCCCA ACACAACTCA 960
AAGTCCAGAA AATAACAGTG TCAGGGGAAG GAATCAATAG CGTCAATGAA GGAAGACATG 1020
GGATTGGTGA TATGGTGGGC TCCTTGAGGT GCCTACCACC CTCAGGCCCC AGAGAATGGA 1080
ACACCACCAA CTTTTGGGGG GTAGTGAGCA GTTTTCTCCA AGAACTCAGG GTCCCTTTCT 1140
TCTGCTTGGA AGACGGCCAA CAAACAAGAA AGGAGCCCAT CTTGTGAGTA GGAAAACTGA 1200
GGCCCGGGGA GGAGAGATGG TAGCTGACTG GTGACCAAGT GGAGGCCCAG GCCTTAACCT 1260
CTTGCCTCCC TGGTCTGACC AGCAATGAAT GTCACCTCAG CTATCTTGGG GACTTCCTCT 1320
TATTCTTTCC CAACCTTAAC GACTCTGGCA GCAAGCGAGT GTCTTCCTGC TCTTGCACAT 1380
GCAACAACAA TGTGGACAAT GTGAGTCCAG GGACAATGGG GACAACTCCT GGACCCCTGC 1440
CACAATGCTT TCCTCCTCTA CCAGCCAAAT CAGACTTGCT CTTTAAGCCC CATTTCCTCT 1500
AGAAAGTCTT TCCAGATAAC TCATGCCCAA TCAGTCTTTT CCTTCCCCTG ACACTCTGCT 1560
ATTGTCTGGA CTTTGAGTTG TGTTGGGCAC TTATAGCTTA CGAGTCCTGC CTCTCCAACA 1620
AGATCCAAGG CATCCGGAGA GTAGGGACCA TGCCTCCAAT TTCTTCCAGG AGGTCTGGTG 1680
ACGCTGAAGG CAGCCTCTAC CTTCCTCTGC GCCTGACTAT TCCCTGCTCT CTGAGCTACT 1740
TCTCATCTGG GAAATGGAGG CATAACCCCA GATGTACAGG GGGATTGATA ACACAGATCA 1800
AACAATGAGC GCGATGTCAG GCGCACAGCA GGTCCTCAGG CAGCACTAGC TGAATATGTG 1860
AACAAATGAG TGGACAGAGG GATGGATGGA AGGATTCTTG AAGCTTCCAC TGCACAGGGC 1920
TGTTGAAACA ACACAACGCG GGACCTGGAT GTAGATTTCA TCTCGCAGCT GAGCCATGTG 1980
CTTCTCTGCC TTGCATTTCA CCCAAGCCCC CAGTATGAGG GGGACACAGG GCTGGCTCAG 2040
AGCAGGCCCC GCTCAGCAAA ACTCACTGAA CTCCCAACAG GGCAAAACCT GCAGGCCCCA 2100
CAGGGAGCTT GGGACCTGAC TGAGAAGAAT CAGGGTTCCC AGGGGTCTCA GTCACAGGGA 2160
AGGTCACATC CATCTCTCTG GGGAACATTA TCACTGGGTT GAAATGGAAG CCAAAGGGTA 2220
AAAAGACACC CGAGTCTGTG AAGCAGGAAC TGGCAAAGCC CATGTGGCAG ACATGCAGCC 2280
TCCTATAACC CTCTGCCAAG GCCAGCCTGG ACCCACCTTC TCCACACAGC CCTCCCAGAC 2340
TTCCTCTGTC TGGACACAAC AGGACCCACT GAGGAAAACA ATGATGACTT GGGAGTCTGA 2400
CAACCTGGGC TCCATTCCCA GGTGTGGCAC GTACTGGATG GATGAAGGGC CAGCCATTCC 2460
CTCTATTTTT 2470