EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS191-00376

Organism

Homo sapiens

Tissue/cell

Trophoblast

Coordinate

chr1:17231820-17232410

dbSUPER

Number of super-enhancer constituents: 55
ID	Coordinate	Tissue/cell

SE_01476	chr1:17230218-17232448	Adrenal_Gland
SE_02875	chr1:17229707-17232419	Astrocytes
SE_03430	chr1:17230704-17232518	Brain_Angular_Gyrus
SE_04111	chr1:17229411-17233706	Brain_Anterior_Caudate
SE_05172	chr1:17229358-17235180	Brain_Cingulate_Gyrus
SE_06210	chr1:17229404-17235529	Brain_Hippocampus_Middle
SE_07232	chr1:17229372-17233463	Brain_Hippocampus_Middle_150
SE_08076	chr1:17229224-17235365	Brain_Inferior_Temporal_Lobe
SE_08889	chr1:17231799-17232278	Brain_Mid_Frontal_Lobe
SE_10448	chr1:17229556-17232759	CD19_Primary
SE_11024	chr1:17229104-17234222	CD20
SE_12131	chr1:17229519-17232577	CD3
SE_12912	chr1:17229894-17232147	CD34_Primary_RO01480
SE_13570	chr1:17229822-17232807	CD34_Primary_RO01536
SE_14124	chr1:17230231-17232303	CD34_Primary_RO01549
SE_14531	chr1:17229468-17233435	CD4_Memory_Primary_7pool
SE_15440	chr1:17229663-17232792	CD4_Memory_Primary_8pool
SE_15839	chr1:17229579-17232410	CD4_Naive_Primary_7pool
SE_16401	chr1:17229825-17232799	CD4_Naive_Primary_8pool
SE_17223	chr1:17229783-17232430	CD4p_CD225int_CD127p_Tmem
SE_17702	chr1:17229386-17234307	CD4p_CD25-_CD45RAp_Naive
SE_18224	chr1:17229114-17233125	CD4p_CD25-_CD45ROp_Memory
SE_19865	chr1:17229525-17232518	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20182	chr1:17229398-17233461	CD56
SE_20877	chr1:17229554-17232585	CD8_Memory_7pool
SE_21501	chr1:17229448-17232520	CD8_Naive_7pool
SE_22012	chr1:17229449-17232551	CD8_Naive_8pool
SE_22656	chr1:17229502-17233323	CD8_primiary
SE_23911	chr1:17230736-17232315	Colon_Crypt_2
SE_25305	chr1:17229819-17232413	Colon_Crypt_3
SE_27153	chr1:17230113-17232833	Esophagus
SE_28353	chr1:17229567-17232686	Fetal_Intestine
SE_29508	chr1:17229623-17232662	Fetal_Intestine_Large
SE_29649	chr1:17229432-17233478	Fetal_Muscle
SE_31118	chr1:17229456-17233699	Fetal_Thymus
SE_31881	chr1:17230221-17233716	Gastric
SE_33540	chr1:17229437-17232524	H2171
SE_35172	chr1:17229620-17232760	HeLa
SE_40019	chr1:17230206-17233254	K562
SE_42843	chr1:17229839-17233510	Lung
SE_45444	chr1:17230015-17232389	NHLF
SE_47744	chr1:17231842-17232377	Pancreas
SE_51608	chr1:17229337-17233624	Skeletal_Muscle
SE_53155	chr1:17229646-17233509	Small_Intestine
SE_53544	chr1:17229560-17233365	Spleen
SE_54964	chr1:17229200-17233698	Stomach_Smooth_Muscle
SE_55554	chr1:17230186-17232572	Thymus
SE_61917	chr1:17221528-17256732	Toledo
SE_63124	chr1:17215209-17241689	Tonsil
SE_63250	chr1:17222916-17254487	GLC16
SE_63321	chr1:17222804-17249569	NCI-H82
SE_65449	chr1:17229946-17232220	Pancreatic_islets
SE_66885	chr1:17229437-17232524	H2171
SE_67172	chr1:17229191-17233453	MM1S
SE_67642	chr1:17229424-17231931	u87

Enhancer Sequence

GTAATAAGGT AGAAATTAAA AAGAAAAAGT ATTTTCCTGT ACTTGCTTGG CTGCAAGGTC 60
AGGAACAGAT AGTTTCTGAA AAACCACATC GCTGAGAAAT GAGTTCTGGA GACTCTCTTA 120
ACAGTCTGTT ATCCCTAGGA AGGATAAGAG CAAGAAACAG CAAATGCTTT TATTACCTTC 180
TCTTTTCCCT TTACCATTTC TCACTATTCA AGTTTTGTTA AGTTCTTGAT TTCCCTTCAG 240
TGCAGCTGCA AGGTCACCAG CTATTCTTGC CTCGTGAGAC CTGTCACAGT TTGACTAGCT 300
GCCTTTGTTC TGCTTCTGTA AGCCCTCTTG CCTGCCCCGC GAGTTTGGTG CCATCATAGT 360
CCCACCATGC CATTCAAACT AGCCAACCCC CTTTTTGAAG TGTGTATAAA AGTCAAACCC 420
TGTCTTTGTT CGGGGCTCAG CCTTTGGATT TTAATCCTCT GGGCCTGAGG GCACTCAATA 480
AAATCCTCCT GTTCCACCCA TTGGTCTCTC TGTTCTCCTG ATTCCCACAA CAGTAGTAGG 540
GGACTGTGTC TGCACTTTCC CCTGGTCTTT CACGGTATGA ATAATAGCCT 590