EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-02213

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr1:203236310-203237110

dbSUPER

Number of super-enhancer constituents: 50
ID	Coordinate	Tissue/cell

SE_03393	chr1:203236469-203237060	Brain_Angular_Gyrus
SE_03985	chr1:203236333-203237391	Brain_Anterior_Caudate
SE_04945	chr1:203236288-203237378	Brain_Cingulate_Gyrus
SE_05898	chr1:203236305-203237487	Brain_Hippocampus_Middle
SE_06796	chr1:203236388-203237290	Brain_Hippocampus_Middle_150
SE_10170	chr1:203236323-203237303	CD19_Primary
SE_11831	chr1:203236473-203237259	CD3
SE_14427	chr1:203236257-203237374	CD4_Memory_Primary_7pool
SE_15994	chr1:203236220-203237126	CD4_Naive_Primary_7pool
SE_16865	chr1:203236398-203237252	CD4p_CD225int_CD127p_Tmem
SE_17312	chr1:203236354-203237486	CD4p_CD25-_CD45RAp_Naive
SE_17785	chr1:203236392-203238995	CD4p_CD25-_CD45ROp_Memory
SE_18348	chr1:203236307-203237416	CD4p_CD25-_Il17-_PMAstim_Th
SE_19143	chr1:203236377-203237430	CD4p_CD25-_Il17p_PMAstim_Th17
SE_19992	chr1:203236292-203237256	CD56
SE_21932	chr1:203236356-203237454	CD8_Naive_8pool
SE_22316	chr1:203236268-203237323	CD8_primiary
SE_23441	chr1:203236504-203237039	Colon_Crypt_1
SE_24037	chr1:203236572-203237133	Colon_Crypt_2
SE_24893	chr1:203236606-203237060	Colon_Crypt_3
SE_25439	chr1:203236302-203237396	DND41
SE_25807	chr1:203236375-203237354	Duodenum_Smooth_Muscle
SE_26687	chr1:203236491-203237336	Esophagus
SE_27668	chr1:203236340-203237175	Fetal_Intestine
SE_28606	chr1:203236352-203237246	Fetal_Intestine_Large
SE_29589	chr1:203236317-203237094	Fetal_Muscle
SE_30896	chr1:203236392-203237209	Fetal_Thymus
SE_31419	chr1:203236459-203237206	Gastric
SE_32519	chr1:203236345-203237171	GM12878
SE_37070	chr1:203236267-203237472	HSMMtube
SE_40823	chr1:203236360-203237230	Left_Ventricle
SE_42244	chr1:203236433-203237375	Lung
SE_43501	chr1:203236142-203237472	MM1S
SE_48192	chr1:203236386-203237469	Psoas_Muscle
SE_48633	chr1:203236514-203237331	Right_Atrium
SE_50070	chr1:203236401-203237199	Sigmoid_Colon
SE_51128	chr1:203236438-203237425	Skeletal_Muscle
SE_52362	chr1:203236386-203237127	Small_Intestine
SE_53333	chr1:203236410-203237369	Spleen
SE_55095	chr1:203236499-203237205	Thymus
SE_58291	chr1:203236214-203310877	Ly1
SE_58901	chr1:203236169-203298087	Ly3
SE_59628	chr1:203236329-203298077	Ly4
SE_60396	chr1:203236100-203315897	DHL6
SE_61013	chr1:203236073-203298344	HBL1
SE_61446	chr1:203236043-203309894	Toledo
SE_62225	chr1:203236326-203298200	Tonsil
SE_63328	chr1:203234993-203265727	NCI-H82
SE_65315	chr1:203236086-203237412	Pancreatic_islets
SE_67145	chr1:203236142-203237472	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I203266

chr1

203235981

203237337

Enhancer Sequence

TAATTATTTC GTTCATTTAG TTTTATTGAT TTGATTGTTC TTTGCCTTTT CTTTTACATT 60
TTTTCTGTTG AATTATTTAT TTTGATTCGT TTCTTAGCTG GCAGGACTAT GTCCTCAAGT 120
ACTATTTTTC AAAAAGGGCT TATAGAAGAG CTCTCCCATC CTCAGTGGAG TTGGCTAACA 180
TCCTGTACCA GTTACCAGTT TATTACTCTC TGGCTCCAAA CGTTTCTCCC TTGCCAGCGG 240
GCACAGTGTT AAACTGTGTC AGTAGAGGGC GCTAGAGGAC AGAGAGAAGA AGAGACTTCT 300
CTTGCGGTTT CTTTAAGCTT TCCTTCCTAC TTGCTTTCGG GACTCTGAAC CCCCGGGGTT 360
CTCAGCTCAG TTTCAGGGCA CTTCCGCAGG CATCTTCACG GCTAGTTCTG TGGGTGTCCC 420
ACTTAGTTTC CCAGTGGCGA GTTCAGCCGC ACCGTCTTGG GTGGATTCCT GGTGGAGCCG 480
ACTTGACCCA GCCAGTTTCC TGCGAAGTCC CGCATGCGCA CTTCCCCGGG GGCAGCTTCC 540
CAGCAAGTTC TGCGTGAGTC CTAGGTGGCT TTGCCATGAG TTCAGCGCAT CCCCCAACAG 600
CAACTTCCGG AGGAATTTTG TGGGCACCCC AGCAGGGGGC TTCCAGCCCC TGAGCCGTGG 660
CCTGCCGTTC TCTTCCCCAC AATGTTCGCT CTCTTGACTG TGGCCCGGTT CTGTCCAGGG 720
ACAACCCAGA GAACTCTTCT GCCCTCAATG GGCTGCAACG CACTTTCTCC AGCAAGGACT 780
GAACCCCAGT CTCGGAGAGC 800