| Tag | Content |
|---|
EnhancerAtlas ID | HS184-00591 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr1:39608200-39608910 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxd3 | MA0041.1 | chr1:39608709-39608721 | AAACAAACATTT | - | 6.27 | | RORA(var.2) | MA0072.1 | chr1:39608627-39608641 | CTGACCTACTTTTC | - | 6.66 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_00416 | chr1:39607432-39609721 | Adipose_Nuclei | | SE_02052 | chr1:39608108-39608826 | Aorta | | SE_25799 | chr1:39606480-39609540 | Duodenum_Smooth_Muscle | | SE_32006 | chr1:39608179-39608893 | Gastric | | SE_35822 | chr1:39605780-39609757 | HMEC | | SE_36947 | chr1:39605532-39611756 | HSMMtube | | SE_42256 | chr1:39607415-39608945 | Lung | | SE_45768 | chr1:39607341-39608639 | Osteoblasts | | SE_47164 | chr1:39606982-39608398 | Panc1 | | SE_51765 | chr1:39606612-39609191 | Skeletal_Muscle_Myoblast | | SE_54583 | chr1:39606659-39609601 | Stomach_Smooth_Muscle | | SE_63563 | chr1:39606612-39609205 | HSMM | | SE_64261 | chr1:39605649-39609602 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I039139 | chr1 | 39605512 | 39609683 |
|
Enhancer Sequence | GAAAATATTT GGGGGAAGGA GTGGGGAGAA GCTCAGGCAG CTCCATTTAT GGTTGAGCAA 60
TGCTTGGTAT TCTACAGAAG GGACCATATG GACAGTGGAA GAGAGTTTAG CATTCTGATT 120
GTTCACCTCT TGCTCCTTCC ATTCTGATGG CTAATTAGGG ACACCTCATT AGCTATCAGA 180
GTGGAACAAG TATTTGCCAG GCTGACATGA GCCTCAGCCC TGCATCCTGC ATCTTCTGCT 240
TTCCCAACCT GCTGAGTCAC CACCTAGGAA TGGCAGTAGC CAGGTTACCA CCTGGAGCAC 300
CTGGAGCACT CTTGGCATAA TGCACTGTTG ACTGGTTTTG GTCTCCTAGA CACAGCTTGG 360
GCCTCTCCAA GCCTGTTGGA GTGATAGGCT GGGTCTTAGC TCTCCTTCCA GCTTGTTCCA 420
CAAGGCGCTG ACCTACTTTT CAGGGACAAT TAAGTGTTTG TGAGCAAAGG AAGGCGGTGA 480
CCCGAGTGAA GGTGAACCAG AGCTGCATTA AACAAACATT TGGAGTCACT TTTTCTATCT 540
TACACAGGAG GGCCCATCTC AGTCCAAATG GAATGGCAGA TCAGGCTGAT TGTGGTAGCC 600
ACATTCTAGA TGCTTATCAA GATAGTCAAC TAACCCTTGA ATTTTTATTC TTTCTATCAA 660
TGTACCTTAA TATCAGAAGT TACTTTTCAT AATCATTGTA CCCCTTGTCT 710
|
