EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-00515

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr1:32421610-32422040

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:32421832-32421851

CAGTTCCCTCTGCTGGCCC

6.36

dbSUPER

Number of super-enhancer constituents: 48
ID	Coordinate	Tissue/cell

SE_00185	chr1:32419404-32424304	Adipose_Nuclei
SE_01455	chr1:32421522-32422412	Adrenal_Gland
SE_03010	chr1:32421730-32422365	Bladder
SE_09496	chr1:32418058-32428385	CD14
SE_11611	chr1:32420063-32422813	CD20
SE_12303	chr1:32421408-32422344	CD3
SE_13610	chr1:32419779-32422620	CD34_Primary_RO01536
SE_14567	chr1:32419441-32422703	CD4_Memory_Primary_7pool
SE_18176	chr1:32420050-32422535	CD4p_CD25-_CD45ROp_Memory
SE_18474	chr1:32419953-32422691	CD4p_CD25-_Il17-_PMAstim_Th
SE_19618	chr1:32421430-32422444	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20913	chr1:32419675-32422740	CD8_Memory_7pool
SE_22706	chr1:32421400-32422397	CD8_primiary
SE_24317	chr1:32421658-32422218	Colon_Crypt_2
SE_25246	chr1:32421733-32422249	Colon_Crypt_3
SE_25437	chr1:32421516-32422360	DND41
SE_26248	chr1:32419683-32422741	Duodenum_Smooth_Muscle
SE_27326	chr1:32419664-32422845	Esophagus
SE_28018	chr1:32419790-32422410	Fetal_Intestine
SE_29138	chr1:32419770-32422630	Fetal_Intestine_Large
SE_30289	chr1:32421416-32422384	Fetal_Muscle
SE_31027	chr1:32421467-32422341	Fetal_Thymus
SE_31788	chr1:32421397-32422862	Gastric
SE_32591	chr1:32421593-32424967	GM12878
SE_34572	chr1:32421591-32422408	HCT-116
SE_34675	chr1:32416735-32424252	HeLa
SE_37823	chr1:32419700-32422879	HSMMtube
SE_38810	chr1:32419525-32422434	HUVEC
SE_39284	chr1:32421570-32422477	IMR90
SE_39509	chr1:32421570-32422231	Jurkat
SE_39960	chr1:32421512-32422615	K562
SE_41137	chr1:32418170-32422571	Left_Ventricle
SE_42547	chr1:32419802-32422957	Lung
SE_45230	chr1:32419766-32422360	NHLF
SE_46136	chr1:32419432-32422701	Osteoblasts
SE_47391	chr1:32419677-32422469	Panc1
SE_47857	chr1:32421787-32422240	Pancreas
SE_49021	chr1:32421571-32422333	Right_Atrium
SE_50456	chr1:32421482-32422352	Sigmoid_Colon
SE_51637	chr1:32419513-32422881	Skeletal_Muscle
SE_52642	chr1:32421535-32422413	Small_Intestine
SE_53748	chr1:32421433-32422422	Spleen
SE_55181	chr1:32421645-32422277	Thymus
SE_56686	chr1:32419684-32422618	u87
SE_59623	chr1:32331606-32430327	Ly4
SE_62431	chr1:32376082-32428121	Tonsil
SE_64663	chr1:32419773-32422373	NHEK
SE_66311	chr1:32421570-32422231	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I031951

chr1

32417141

32426201

Enhancer Sequence

CTGGGGCCCA ATTGTCCTTC TTCCTTCAAT ATCTAATGAC TGTTTCCCAG CTATCAGAAA 60
GGAATCCAAC TTCCCCTCCC CCAGAGCTGT GAAACTGAGT AGCAAAGCTT GCTCAAGCTC 120
CTGAGTCATT CAGCAAAACC AGCCCAAGAT AATCAGTGGA TCAAGGAAAC TAGATGCAGA 180
GTGGGGAAAA CCCAGCCGCA AAGCTGGGGC CTTCTCGCAG GGCAGTTCCC TCTGCTGGCC 240
CCTCTGGTGA GCTTTCACTT CAGGTTCACA AACAAGACAG CATCTTCCCA GGCCCTCCTG 300
AACCCAGAAT AAGGCCTTAG CTACTCCTGG GTCTCTCAAC AGCAGCCAGG CCTTTCTCTG 360
GAATCTTGTT TGACACAAAC TTTTTGCCTT TGGACAAACT CTCTCCTTCC CTCCGTATCC 420
CAGGCCTCAG 430