EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-00148

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr1:10863900-10864990

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gabpa

MA0062.2

chr1:10864555-10864566

CCGGAAGTGGC

6.62

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_23090	chr1:10862855-10865211	Colon_Crypt_1
SE_23754	chr1:10863812-10865165	Colon_Crypt_2
SE_24724	chr1:10862927-10865137	Colon_Crypt_3
SE_26723	chr1:10862856-10865240	Esophagus
SE_31374	chr1:10862873-10865194	Gastric
SE_33443	chr1:10862555-10865276	H2171
SE_41555	chr1:10863901-10865151	LNCaP
SE_42099	chr1:10863783-10865243	Lung
SE_50332	chr1:10863810-10865173	Sigmoid_Colon
SE_52397	chr1:10862860-10865240	Small_Intestine
SE_65281	chr1:10864092-10864999	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I010802

chr1

10863018

10865118

Enhancer Sequence

TAAAGAACGA ATTGAAATGA AACCCTGCAG ATATATCTTT TCGAGGCCCC CTCAGCAGCC 60
TGCCTGGGAG ATGTGTGTGG ATAGGGGTGT CATTCATGCC AAGTGGTGAG GTGTGTGAAT 120
GTGATTTTAT CTGTGTGGGA GGGAGTGTGT GTGTGCACTT GTGGAGGTGC GGGACTGCAT 180
TCCCTTTAAA GAAGGGTCCT GGTCCATGTA GGTGTGGCTG TGCTGTATTT GCACATGGGG 240
AGACTGCTTC TGCTGTCAAC AGCCACCCAA ATACACAGCA ATCCAGCCAG GTGAGGGGCA 300
GGGCCGATGC TGACATCACC TCTTACCCGA AGATCCTGGG CCAACACCTT AACCCCTCCC 360
ACGCCTGCCA GGGTGGGGCA GGCCTGGCCC CAGGGCCTGT GGAACAGGGA AAAACAAGTG 420
ATGGAAAAAT CGGAGGACCA GCCTCCCCAC TGTCCTCAGA GCAAAGCCAC ACTCTCACAG 480
CCGTGTGGTC CCTGCCACGT GCCACATGGG CCCACACAGC CCCTGCCCCT TTCTCTTCCC 540
TCCCACCTCT CCCAGATCTG ATAGCAGAAG CCAAAGGGAC TAGTCATGGT GGTGCTTTGT 600
CTTGGGATGC GATCTTGCCA GAAGTTGGTG TGGAAAGGGA ACCTGCCCTG GGACTCCGGA 660
AGTGGCTATG CTTCCTCCCG ACGGGCACCT GTGCAGGCGC CGGCTGCCAC CCTTGGCTGG 720
CGTCACATGG AGGGCGGGGC TGGCCATGGA GGCAAGAAAG AGCTGTTTTG CTGATGAGCT 780
GCCCTCCTGT CACACGGGCC GGAGTGCCAG GTCCCTGGAT GTGGGTGGGG GAGGAGGAGG 840
ACTGCCCTGC TGTGCCAAGC TGGCCCAGAT GTGAGCGACA GCCCGGCCTG CCTCTCCCCA 900
CTCCCACTCA CATATTCACA CACCCTCTGC TCCAGCCACA CGGATCTCCA AGCTACCCCG 960
CTTGCTCCCA GCTCCAGACC TCTGTCTAGA CTGTTCCTTC TGCTCTAAGG CCTTTCGCCC 1020
CTCAGCTCAC CCATTAAGAC CAAAACAGGT GGCACCTCCT CTGGGGAGCC TTCCCTGATG 1080
TCCCTCTGCC 1090