EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS182-01337

Organism

Homo sapiens

Tissue/cell

Spleen

Coordinate

chr1:150531940-150532230

Target genes

Number: 11
Name	Ensembl ID

PRPF3	ENSG00000117360
TARS2	ENSG00000143374
ECM1	ENSG00000143369
LINC00568	ENSG00000228126
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
C1orf138	ENSG00000203804
MCL1	ENSG00000143384
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
CTSS	ENSG00000163131

dbSUPER

Number of super-enhancer constituents: 30
ID	Coordinate	Tissue/cell

SE_00755	chr1:150531631-150544092	Adipose_Nuclei
SE_01227	chr1:150531193-150537420	Adrenal_Gland
SE_01735	chr1:150530241-150537323	Aorta
SE_04228	chr1:150531582-150537864	Brain_Anterior_Caudate
SE_07310	chr1:150530681-150537274	Brain_Hippocampus_Middle_150
SE_08618	chr1:150531647-150537280	Brain_Inferior_Temporal_Lobe
SE_11160	chr1:150532177-150553440	CD20
SE_17377	chr1:150532162-150553370	CD4p_CD25-_CD45RAp_Naive
SE_17879	chr1:150532111-150553231	CD4p_CD25-_CD45ROp_Memory
SE_18425	chr1:150532151-150553362	CD4p_CD25-_Il17-_PMAstim_Th
SE_25044	chr1:150531205-150532409	Colon_Crypt_3
SE_26032	chr1:150531381-150542256	Duodenum_Smooth_Muscle
SE_27116	chr1:150530325-150537674	Esophagus
SE_29795	chr1:150531574-150537828	Fetal_Muscle
SE_31938	chr1:150531087-150537563	Gastric
SE_35124	chr1:150532178-150537082	HeLa
SE_37389	chr1:150531646-150544455	HSMMtube
SE_38169	chr1:150530604-150537086	HUVEC
SE_40964	chr1:150530832-150543289	Left_Ventricle
SE_42411	chr1:150530284-150543186	Lung
SE_47642	chr1:150531245-150532073	Pancreas
SE_49126	chr1:150531182-150537534	Right_Atrium
SE_49753	chr1:150532188-150536002	Right_Ventricle
SE_50200	chr1:150531037-150543263	Sigmoid_Colon
SE_51405	chr1:150530419-150544422	Skeletal_Muscle
SE_52781	chr1:150531805-150537730	Small_Intestine
SE_53505	chr1:150530243-150543121	Spleen
SE_54986	chr1:150530454-150538131	Stomach_Smooth_Muscle
SE_62270	chr1:150532150-150553368	Tonsil
SE_65428	chr1:150530574-150537578	Pancreatic_islets

Enhancer Sequence

CAGTGAGTGT CTGGCTGCGC TGTCCTGCCC TGCTCAGCCT GGGCCCCTAG GGGAGGGGAG 60
CTCCTCTCGC TGTACCCCCT CCAGGTCTCT CTGTGCCCCA GAATAAGCCC AGCCAAGCGT 120
TACCACTGTC CTACTTCTTA TAGACTTGGA GGAAAGATGG GCCCTCTCCA TTTGGGATTT 180
CACAATGTCC TAGGAGGGTC CCCACCACCA CCTTTTGGGG AGAGAGGTGG CAGCCAGGGG 240
TTAAGGAGAA TCCCGGGCCT GGCAAAGGTC TGATATGATG GCTGGGGTCG 290