EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS180-01318

Organism

Homo sapiens

Tissue/cell

Small_intestine

Coordinate

chr1:39619350-39620930

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Sox3

MA0514.1

chr1:39620169-39620179

CCTTTGTTTT

6.02

dbSUPER

Number of super-enhancer constituents: 16
ID	Coordinate	Tissue/cell

SE_00416	chr1:39618666-39621629	Adipose_Nuclei
SE_02052	chr1:39619377-39620924	Aorta
SE_14598	chr1:39620404-39621417	CD4_Memory_Primary_7pool
SE_25799	chr1:39619385-39621571	Duodenum_Smooth_Muscle
SE_32006	chr1:39618455-39620905	Gastric
SE_35822	chr1:39618715-39621585	HMEC
SE_36947	chr1:39618590-39621552	HSMMtube
SE_37973	chr1:39615726-39621771	HUVEC
SE_42256	chr1:39618473-39621095	Lung
SE_45768	chr1:39619273-39621651	Osteoblasts
SE_47164	chr1:39617974-39621415	Panc1
SE_51765	chr1:39619776-39621340	Skeletal_Muscle_Myoblast
SE_53123	chr1:39619602-39620989	Small_Intestine
SE_54583	chr1:39618652-39621626	Stomach_Smooth_Muscle
SE_63563	chr1:39619712-39621545	HSMM
SE_64261	chr1:39619201-39621429	NHEK

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I039152

chr1

39618537

39621579

Enhancer Sequence

CCTCACTTGG TCTTGCCATT TCAGCCCTTT CCTTCGAAGT ATGAAGCCTG ACTTTTTTTG 60
TCTTCCTTTC TTCAGCCCTG CAGAGGCAGC TGTGGCCCTG GGGACAGCCC TTTCTTCAAA 120
TGGCAAACTC ATTTTCTGTC CAGCAGACCA GAAGGACAAG GTGTAATTCA ACGCTTCTCT 180
CCACCAGACA CTGCTGCCAG GGGGAGACAA TGAAGAAAGT GATCTTTGTT GCTCCCTGAA 240
TAGGTCCCTG AACCTGGCAC CTGCTTTTGT TACTGGCTCC TTAAGTCACT GGAGACATTT 300
TTGCTGTTTC CTGGGTTAGC AGCTGCTTTG GGATAATAGT AGCAACTGGT TGTCAGGATG 360
TCAGTTCTGC CTCAAAGAAA ATCAGTGTAT TTATATGAGG AGAGTTACCT TTTCTGTTCT 420
TAAATTTCTT CAGGGTTTGT CTGAAGAGTG AGCAGTTGGA AGTCAGCTGT GCCCTTAGTT 480
TGATGACCCC ATGACCCTCA TCTTTGAATC TGAGGAGACA CTGCCATTTC TACTATCCAA 540
GTACTAACCA GGCCTGGCCC TGCTCAGCTT CCAAAATCAG ACGAGATCAG GCGTGTTCAG 600
GGTGGTATGG CCGTGGACGA GACACTGCCA TATTTTTTTC GTCCTGCTCT CCCTCTGGTG 660
AGACTCTGAG TTCTGGGTTC TAGCATGTAG GTCAGTGCCT CCTACCTGGT AAGCATTCAA 720
CAGATATATG TGGGATGAAT GATTGAATGA ATTCCTTGAT CTTGCTGTCC AGGTTCAGTT 780
TCTCTGACAC TGATACGTGG GTGCTCTATG GGAGGGGGAC CTTTGTTTTT AGGAGAAAGA 840
TTGCTTCAAA GGAATTATGG AAGGTGTTGA TTTCTAGGGG GCTTTGGGGG AACTATGGGA 900
ACTCTAAGAT ATGATTCGTT CTCGCCTCAT TGGTCTAGAT CTTTCTCCTC GATAGTAACT 960
GTCTGCTGAC AGACTTGCCC TGTTTCAGGA GCAGTATCCT GAACCTGACT CATCTGGGCT 1020
CTGTCCTTGA GCAGGGTAAG GGATTTTTTT TTTTTAACAG CCATCCTGTC ACTGTAGATT 1080
CAGAAGCCCT CAGGACCACA TCTCAGGCAC TGTAGTCTTG GACTTCCTGA TCTGGCTGCA 1140
TTCAGTCAAG TTCCACTCAG CTCTTAGGTG TCTGTGCCTT TGTAAGGGCT GTTGGAGACA 1200
GAAGGGCTTT TTTTCCGCTT TGTCAGCAGC TGGCCAGAGA ATGCCTATTA GTCTGCCAGA 1260
TCCTAAGTCT TTCACGTTTC CCTGTCTGTG TCTGGAACTT AGGGCAGAAT CTCTTACCAC 1320
CTGAGGTTAC ATCTCACTAT TTGCCTTTGT GGGACCCATT GGAGGATAAA AGATGAATAG 1380
CCATGAAAGG CATGCAGAGT TATTGAACTA TGGTTCTTTG AAATGCTGTG ACTCTGAGGA 1440
AAGATCCCTG GTCTCCAAGA ATACAACTGG AGCCAGACCA TTGCACCACC ACCCTCCTTT 1500
CCCAAGAGCC TCTTTGGAAC CATCACTCAT TCCATAGTTC CAAACATCCT TGTTTTTGTT 1560
TAATTTTTAT CTGATAAATG 1580