EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS179-02899

Organism

Homo sapiens

Tissue/cell

SkMC

Coordinate

chr1:201418990-201421620

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1

MA0040.1

chr1:201420048-201420059

AATAAACAATA

6.62

dbSUPER

Number of super-enhancer constituents: 16
ID	Coordinate	Tissue/cell

SE_00341	chr1:201418889-201420649	Adipose_Nuclei
SE_02688	chr1:201419531-201420717	Astrocytes
SE_03836	chr1:201418997-201420470	Brain_Angular_Gyrus
SE_04842	chr1:201416275-201421120	Brain_Cingulate_Gyrus
SE_05817	chr1:201416349-201421730	Brain_Hippocampus_Middle
SE_06742	chr1:201416483-201421155	Brain_Hippocampus_Middle_150
SE_07798	chr1:201416177-201421169	Brain_Inferior_Temporal_Lobe
SE_26585	chr1:201419717-201420675	Esophagus
SE_45671	chr1:201418987-201421654	Osteoblasts
SE_52053	chr1:201419454-201420858	Skeletal_Muscle_Myoblast
SE_55901	chr1:201419097-201420761	u87
SE_55901	chr1:201420797-201421737	u87
SE_63790	chr1:201419001-201420948	HSMM
SE_65522	chr1:201419792-201420516	Pancreatic_islets
SE_67648	chr1:201419097-201420761	u87
SE_67648	chr1:201420797-201421737	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I201449

chr1

201418930

201421308

Enhancer Sequence

TTTTGTATCT TTGGTACAGA CGGGGTTTCA CCTTGTTGGA CAGGCTGCTC TCGAATTCCT 60
GGCCTCAAGT GATCTACCCA CCTCGGCCTC CAAATGTGCT GGGATTACAG GCGTGAGCCA 120
CCACGCCTGG CCGAGGATTT ATTAGTAAAA CTCCCAAGCC TTTGCTCTGG ACCCCATATT 180
CCCATTTTTG CTCCCTTTCC CTCCTGTTGG CCCTACTTCT TCTACGGTGC CTTCAGCGTC 240
TTCCTGCAGC TGTGCCAGGG CCAGTTTTCA GGTCCCACAG ACCTGAGCTC TGATCCCAGC 300
TCCCACACTA CACAATCTGC AATTTTGAGC AAGTTACATA TTAAACTTCC CTGATTCTTA 360
ATTTCCTTAT CCACAAAGTG AGAAGGGATT ATCTCTGCTA CAGGGGGCAA GTAAGATCAA 420
ATAAGATAGT GGTCATGAAA ACCTCATGAA AATTTATTAC CAGGCCACAC AGCAGAGATT 480
TTATTACAAT CATCAACGTG CTAATGGATG GCCTTCCCAC CCACCTGGAG ATAAGAGTAT 540
CCTCTTCCAG CTTCTTGGAG ACTATAATAA TAATTATCCT TATTATTATT AGGTGTGTAA 600
TGACTTAACT TTACTGAGAA TTTTCACACC CTTCAAAATG TTACAACATT CCCAAAGAGA 660
TCCTGTGTTA GAAGAGGTAG GGGAAGAAAA ATAATTTTGG AAAGCTGGAA ACTTCCAGCA 720
TCACTTGGGT CATTTACAAA TAATTTGTTT TCTGCCAGAG ATAACCAAGG TCCTCACATC 780
CTGGACACTT ACAGTCTAGC AAGGAGAGGG CTGCTAGATT TCAGCAGCCC CGCCCTGGGG 840
CCAGTGTACA GTTATTTCCA GTGGGTCCGG CGTTCATCCC AAAGCCCAGT ATAGTCTGGG 900
GCTAGACAAA GGCCTTTCGG ATGCCAGCGA CGACCAAAGA GGAGGCTCAT GCACCCCAGG 960
CAACACCCTT CCTGCCCTGG TCCTGACAGC CACACCAAGG GTTAACCAGA CCCAGCCCTT 1020
CCTGGCTACT GGCAGGACAG GCAGGCTTAA GTCCCCTCAA TAAACAATAG TGGGGCCACT 1080
TGCCAGCACC ACACACATGA GCAAAAACTC TGCTTGGACC TGAAGAGCCC CCTCACCCCA 1140
CCCCTTCCCA GCTGCTCAGG CCCAGGGAGG GGTTCGCAGT TCTGGAAAGG GTTAAGTCTG 1200
CAGGAGGTGC CTGGGACCCA GCTGTTTCCT GTGGGCAGGG GCGGGGGATT TACAGCCTCC 1260
CCCACCGTGG GGCTACCAAG CCTGTGTTGG GGAAGGATGC CTCTGAGTCC TTGCTCTGAG 1320
GCCAGACTCC CGTCATGCAG CCAGGGCCTC CCACGCAGGC GCCAGCAGAA AGGAGGGGGC 1380
AGGAAAGAGG AGCCTCGGGA TCCAGGAGAA AGCAGGCTGG CCTCTGCAGA ACAAAATGGG 1440
CAGATGGGGA GCTGGCCCTG TCAGTCCCGG GCCTCACCTC ATTTGGAGAC GGTAGCCTGT 1500
GGCAGGGAAG TTGGTCTGGG AGTTCAGGCA CTAGGCTTCC ATTTCAGGTG AAAATGTGAT 1560
GTTATGCTGC TCTGTGCCTC GGTTTCTTCC CTGCTGGGCA CACCCTTGGT GGCAGCCCCC 1620
ACAAAGTGTC CACTTCCTTT ATTTCTTTTT TTTTTTTTTT TGAGACAGAG TCTTGTTCTG 1680
TTGCCCAGGC TGAGTGCAGT GGCACAATCT CAGCTCACTG CAACTTCCGC CTCCTGGGTT 1740
CAAGCAATTC TCCTGCCTCA GCCTCCTGAG TAGCTGGGAC TACAGGCGCA TGCCACCATG 1800
CCCGGTTAAT TTTTGTATTT TTAGTAAAGA TGGGGCTTCA CCATATTGGC CAGGTCTCGA 1860
ACTCCTGACC TTGTGATCCG CCTGCCTCCG CCTCCCAAAG TGCTGGGATT ACAAGAGTGA 1920
GCCACCGCGC CCAGCCAAAG GGTCCACTTT CTAATCCCGG GAACCTGTGG ATGTTACCTC 1980
ATATGGCAAA GACTTTGCAA ATGTGATGAT GTTAAGGAAC TTGAGATGGG GAGATTATTC 2040
TGGATGAGCT GGGTGGGCTG TAAAGTTCAT CACATGTCTT TATTAGAGGA AAGCACATGG 2100
AGATTATAGA CAGCAGAGGA GAAGACAATG TGACCACAGA GGCAGAGGTG AAAAGTACTA 2160
TCCCGTAAGC CACAGGACAC CTGGAGCCAC CCAAAGCTAA AAGAGGCAAG ACATCATTTC 2220
TCACCCAGAA CCACTACAGA GAGCACAGCC TTGCCAACAC CTTGACTTTG GCCCACTGAT 2280
TCTGATTCCG GATCTTTAGC TCCAGAACTG CAGGAGAAGG AATTTTTGTT ATTTTAAGCC 2340
ACCAAGTTTG GGGTAATTTC TTACAGCAGC CCCAGGAATC CAGTACCCCC TCCTCACCCG 2400
ATAGAACAGA GGAGAACATG TGCCCGGCCC TGGCTCCCTC AGGAAGGGGC TCTTTTTCTA 2460
TGTTGTGTTG GAGAATTTCC TTTTGAAGGA GTTCATCTGC CCTGCCATGG GATAGCACTT 2520
TTAATTGGTC AAAAACGACA CTCCTAGTTG GGCTTGGTGG TGGGCGTCTG TAGTCCCAGC 2580
TACTCAGGAG GCTGAGGCAG GAGAATGGCA TGAACCTGGG AGGCAGAGCT 2630