Tag | Content |
---|
EnhancerAtlas ID | HS179-02081 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:145113420-145115730 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LHX2 | MA0700.1 | chr1:145115574-145115584 | GTTAATTAGT | - | 6.02 | mix-a | MA0621.1 | chr1:145115573-145115584 | AGTTAATTAGT | + | 6.14 |
|
| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_00110 | chr1:145109341-145120995 | Adipose_Nuclei | SE_02370 | chr1:145113433-145116175 | Astrocytes | SE_09153 | chr1:145108944-145121268 | CD14 | SE_36703 | chr1:145112883-145116455 | HMEC | SE_37044 | chr1:145112592-145117027 | HSMMtube | SE_39012 | chr1:145112193-145116292 | IMR90 | SE_44224 | chr1:145112208-145121153 | NHDF-Ad | SE_44968 | chr1:145112756-145115992 | NHLF | SE_45537 | chr1:145109103-145121359 | Osteoblasts | SE_51844 | chr1:145113549-145115880 | Skeletal_Muscle_Myoblast | SE_55651 | chr1:145112164-145123546 | u87 | SE_63643 | chr1:145113469-145116071 | HSMM | SE_67559 | chr1:145112164-145123546 | u87 | SE_68407 | chr1:145053820-145118488 | TC71 | SE_68408 | chr1:145053820-145118488 | TC71 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 4 | ID | Chromosome | Start | End |
GH01I120157 | chr1 | 145113319 | 145115924 | GH01I148771 | chr1 | 145112227 | 145116926 | GH01I146321 | chr1 | 145112942 | 145116344 | GH01I149354 | chr1 | 145113079 | 145116277 |
|
Enhancer Sequence | TATTTATATT AAAGTAGGCA AACATATTTG GATAATTAAA TATTTTTATA TAATTTCATA 60 TATTTTTTTG AGACAGAGTC TTGTTCTGTT GCCCAGGCTG GAGTGCAATG GCACGATCTT 120 GGCTCACTGC AACCTCCATC TCCTGGGTTC AAGCGATCTT CCCACCTTAT CCTCCTGAGT 180 AGCTGGGGCT ACAGGCATGT GCCACCACGC CTGGCTAATT TTTGTATTTT CTTAGTAGAG 240 ATGGGGTTTT GCCATGTTGT TCCGGCTGGT CACAAACTCC AGGGCTCAAG CAATCCACTC 300 ACTTCAGCTT CCCAAAGTGC TGGGATTACA GGCATGAGCC ACAACACCCA GCCCTTTATA 360 TAATTTTAAA AGTGTAGGTA ATTAGGTAAA ATTAGGTTAA AAGTATATGT ATATTTACCT 420 GATATTTAAA TATTACCTAA GTGTTTAATG TGGACATGTA AGCTCTTTAA AGATAGTGCT 480 TATGTATTTT ATATCTGTTT CACATACTCC TTATATATCC CCCACAGAAA TGGTCACAAA 540 TAGGTTCCTT AATAAGTATT TTTGAATTCA GCCATGCTAT ATATTCATTA GTAAGTGAGT 600 TTTCTTTTAT TATGAACTAC AAACTTTAAC CTTTTTTTGA GTAGTGAGCA GTTATTCATT 660 TACCTTCACA CTCTTTAAAT ACCAAATTTT GAGTGAGTGA GTGTGTAAGG TTTTGTCATA 720 CAGACTTGCA ATTCCTATAT GGGATAAAGT AGACTAGCAC AGGAATTTTT CTTGTATCAC 780 TCATGCAAGA CTCTAAATTC CTTAAAGGCA GGGATCATGT ATATTTTGAT CACTGTTGTA 840 TCCTCAGCAC TTCACATGGT GCCTGTCACA TAAATATTTG TTAAATGACT TCTCCAAGCA 900 ATAGCTTTGT CTTTATGTTA TCCTGTATTT CAAAACGTTC ATATATAAAT TCTCTCAACT 960 ATGACTTGTT TCATAGGGTC TAATAATTGT TCCTCTGCTG AGTTATTCTC AGCAGATTTA 1020 GATTCATTTA GCAAATGTTT ATTGAGCACT AACTATATAC CAGGCCCTGT TCTGGGCATT 1080 CAGGATATAG CAGCAAACAC AATAATTTAA AATCCCTGTC CAGTGAAGTG TATATTCTTG 1140 TAGGCTCTGT AAAAAGATGC CCTGTGCATT GTCATGGTTA TTTCTCAGTC CCTGACTCTT 1200 CTTCCGTCAC TAGATGTTTT TCTTACTCAT GTGATCAGTT GCTAATTCAG ACGTGGCTGT 1260 CATGCCTGTG TTATTAAGTA ACGCCATGTT TCCCAATCAA AACCAGTCTC TATTAAGCAA 1320 CTCCAAATAT TCCAAAAGCA TTCTTTAAGG AAGAAACAGC CGGATTGCAA AATAGTTTTT 1380 TCTGAAATTT CAAGAAGTGA AAAGTTTGAT CAGAATTTAT TATGTCAAAT GGAGAGTTTG 1440 TGTTTATTAT TAAAATATGC CCTATATTTT AATATGGTCT AGCTTGTGTC TATCTGGCTA 1500 TTTCTCTAAG TGTTTAGTTA ACTGTTATAA GAAGATAACA ACATTACAAA TGTCCTTGGG 1560 GGTGAAAAAA CTTGCCAGAA AATACTAAAA AGCTTAATTT ACTTGCGTTT TTTTTTGTAG 1620 TACTTATTGT ATTTTAGTTA CAACTTTCCT ATGTCTATTG AAATATAAAT CCTGATAGCT 1680 TTAACTTCAT AGTAGTCTCT ACTATGTGGA GAATCTTAGA AATGTTAGCA GTCATCATTG 1740 AAGTATAGCT TAAGACTGTG TTTGGTTAAT TGAATTTTCT GGTTATCTGA GTTTGTTTTA 1800 CATGGATTAT CATTATCGTT TTTCAAAATA TAAGAGAATA TGATTCAGAC CATTAGAAGA 1860 TTATGAAGAT AATAATTATT AACATGTAAT AATTATTATA ATTTATCATG TGCAGGCATT 1920 GTTGCTCACT TTACAGGCAA TCTCATGTAC ATACAACTTT ATGACATAGT TACTGTTATT 1980 ATCCCCAATT ATAGATGAAG AAACTAGGTT TTAAATAGGT TACATGACTT GACCAATGTC 2040 ACATAACTTG TACAGGTGAT ATCTGAACCA AAGAGTCTGA GGCCAGAACC TGCACTTCTA 2100 ACCACCTTAC TATATAGCCT CAAAAATTCA GACATAATCT GATCAGCATC ATCAGTTAAT 2160 TAGTATATGC AATGTTAGCC TCAAAATAAA AATGATGATT TAAGATTCAT GGTTGTTGCA 2220 GTGCTGCTCA TTTTGGTTAT TTTTAATGCC TTAATACTTT CGGTAAAATA CTTCCAGGGA 2280 CTAATTAATG TTTTCCTTTT TTCCTCTTTG 2310
|