Tag | Content |
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EnhancerAtlas ID | HS179-01996 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:118155050-118159260 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:118156630-118156641 | TTTTATTGCTT | - | 6.32 | GLIS1 | MA0735.1 | chr1:118156756-118156772 | CCTATGTGGGGGGTCT | - | 6.37 | GLIS2 | MA0736.1 | chr1:118156757-118156771 | CTATGTGGGGGGTC | - | 6.65 | GLIS3 | MA0737.1 | chr1:118156757-118156771 | CTATGTGGGGGGTC | - | 7.12 | IRF1 | MA0050.2 | chr1:118157114-118157135 | TTCTGCTTTCAGTTTTGTTCC | + | 6.44 | IRF9 | MA0653.1 | chr1:118157118-118157133 | GCTTTCAGTTTTGTT | - | 6.01 | NFE2L1 | MA0089.2 | chr1:118155616-118155631 | TAAGCTGAGTCATTC | - | 6.29 | Nfe2l2 | MA0150.2 | chr1:118155618-118155633 | AGCTGAGTCATTCTT | - | 6.2 | Nr5a2 | MA0505.1 | chr1:118158690-118158705 | GCAGACCTTGAGCTT | - | 6.11 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_11059 | chr1:118146523-118172865 | CD20 | SE_15163 | chr1:118153670-118158216 | CD4_Memory_Primary_7pool | SE_21364 | chr1:118154830-118158002 | CD8_Memory_7pool | SE_31627 | chr1:118155085-118157819 | Gastric | SE_31627 | chr1:118157948-118158918 | Gastric | SE_43509 | chr1:118148646-118179652 | MM1S | SE_61007 | chr1:118138819-118218057 | HBL1 | SE_62427 | chr1:118147317-118217904 | Tonsil | SE_65708 | chr1:118155677-118157095 | Pancreatic_islets | SE_66608 | chr1:118154437-118162016 | Jurkat | SE_67143 | chr1:118148646-118179652 | MM1S |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 7 | Chromosome | Start | End |
chr1 | 118155055 | 118155809 | chr1 | 118155840 | 118156527 | chr1 | 118156899 | 118157254 | chr1 | 118157270 | 118157385 | chr1 | 118157533 | 118157613 | chr1 | 118157942 | 118158492 | chr1 | 118158914 | 118159131 |
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| Number: 2 | ID | Chromosome | Start | End |
GH01I117611 | chr1 | 118154582 | 118158622 | GH01I117616 | chr1 | 118159121 | 118159270 |
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Enhancer Sequence | ACTGGCAGGG GACCAGGACT CAGTTTATCA ACAATTAAGT TTTATCAACA ATTAAAATTT 60 GAGTGAAATT GCAAGAGGAA GTAACATTCA AGTCAAGTCA AAGTGTTTGA GCTGTCTGGT 120 GACAGCACAT TAATTACTTG ATGAACGCTA AACATGAGCT GCTGCTATGC GCAGTACCTG 180 GAGGCCCGGA ACCTGCAACT TGAATGCCAA CTCCTAAGGG AAGGATCCAT GCAAAACAAA 240 AACCTGGATG GAACTATGCA CGTAATTAGC ATCTGCTCTG AAATGGAGGT CAGCTCACAC 300 TTAGACACTT GTGAATGGGG TGTGTTTATG GTCTAACGTA TGATAAGGGT GGCATTTGAG 360 GAACTAAGAG TTGCTTGTCC CTTTCCTGAT AAGGCCTGGG CAGGGAAGCT GCTAGTGATT 420 AGACAGGACT TTTAGCTGAC TGAGGTCTTC CTTTTGGACA ACTGTTTAAA GCTGTAGGCT 480 GGAGAGTTAG ATGGTAAAGT AGCCTGTGGA AGCAGCCTTT GATGAAACCC GGAGGCTGTC 540 AGCTCTTAAA CCCTGTGGAT TACGTGTAAG CTGAGTCATT CTTACAGTAA GCAGTCTCCT 600 CCTTAGGAAT CATCTCATTT TTCTCAGTCT GGGCAATCTC TAAAACAGAA AGGCAGGCTC 660 TCTTTGGGGA GCTCTTTAAA TGAATTCAGA CCAGTAACAC CTCTGATCTA GAAAGAAGCA 720 GTTGATGGTG GGAAGGTGGT TACCAAGTAG CAACAAGGAT TATTTCCATT TCAAGTTGTG 780 TGTGTAGCAC TTAATGCTGA CACCTTGGAA AAAAATCAAG GCTTTTATGC CCTGCTTCCA 840 TCTGAAGATG TCTGTGTCCT GACCTTGTTA ATATTTCCAT TTGCAACCAC GTCAGAGTAT 900 ACCTTTCAAC ACTTGAACTT GTGTGGCATC CCTGCTGTAA TATCTAGGCC AGTGTTTTGA 960 TTCTGTTTGC TGTTTTGCGG CCACAGCATT AGTTCTTCCA GCGTTATCTC TCCACCCACA 1020 CTTGCCCAAG CATCCTATTT TCAAAGGTGG GAAAGAGCTT TCTGTTTGGA GTTGTCGTTG 1080 GTGGGTGTCT ATGGATGGAG CCCAGTGATA ACCATTCAGA CTGTGTGTTG GCTTCTCACT 1140 TCTTAGTGGG AAGTGAGAAT TCATGGAGGC CCCTTAAACA GCGGAGATCA CAGCCTGGTT 1200 CTGTGGCCTG CCTGGGTTTC AGTCCAGGGC TGCTTTCCAC AGCTCATGTG GGAATCTAAC 1260 CACATTTTTT GACTCTAGTA AACATCATTG GTAAATGGCT GGAGGATGAT AATAACCTTA 1320 AGAAAATAGA ATGAGACGCT GGCTGAATGC AATGGAGCTG AGAGTGAGAA AAGACCAACT 1380 GTGGGGTTTG TTGCGTCACT GACTTAGAAA TGTTTTCTCT GGGCACAGCT TTGTGGCCTG 1440 GGGCAGTTAC TTCTTTGAAC TCAGGTAGAA TGTGTTGCGG GCATTTAAGT GGGCAACTGT 1500 AAAAATAACA TCTTGGAAAA ATAGTGAGCA TAGGATATAT TTTATTGGCC TTTTAAAAAG 1560 TAAAGCATTA TTTTATCTGT TTTTATTGCT TCAGGCCATT CATAATCTAA GCTGCTATTC 1620 CATGTACATG AAACACTCGA GTGTCTGTTA TCTGTAACTT TCATGTGTTT GGGGCTGTGG 1680 AGGAGTCTCC AGAATGTGGC CCCCTCCCTA TGTGGGGGGT CTGGCCCTAG GGAGGAGCTG 1740 GCAGACAAAA GCCTTCCTTA GACTGCCTCC AAACCCTTCC TAGATAACTT CTGGCCTTCA 1800 TCCCCCAAGG AATTCAAGGA GTAAGAGAGG AGGATTTTTT TCAGAAGGCC ATATCCATGT 1860 TGACCCTGGT TTTTCTCGTT TCTGCCCGGT TATCTGCTGC TGCACATGCC AAGCAAAATG 1920 ACCAAGGTCC ATGGTCATTC GAAGCGCCTG GCTCTTTTCT TATGGGTGAA AGAATCTCAA 1980 GGGTCAAACT ACATGCAGGT GGGGGAAGTG ACGGTGTCCA GTCTCAGGTT CAGCATTCAT 2040 GAGGTCCTGT GTACGTTCCA GACTTTCTGC TTTCAGTTTT GTTCCAGCTC TCCTTCCTGG 2100 GCTGGCCCTT TAAGTCCTGG TCACTGCCTG CAAATTTATC AGCCATTTCT CTGTAGCTCC 2160 AGTTGGGTTA TTGGCTTCTT TGATCTGAGA AGGTTGCCGT CTCGACTGTA GCTAGTGTCC 2220 TGTTCTGTTG CTTCATCAGC CTATCAACAC TCTGATCTCC CAGCCATCAG AGGAGTCTCA 2280 GTAATTGTTC CTTTATTCCA TGAGCAAAGC AGCATGCCTT AGTTTTCTGG ATCAGGATCA 2340 GCCCATTCCT GATAATCTCC CTCCTGTGCC ATTAATTTTT CCTCTTATTA CTAGTTCAGC 2400 AAGGCGACTG TGCAGCACCT TCCACTCTTG GGTTCTCTCT CTCTTCTGGA CTTGGTTTCT 2460 CTAAAATCAC CACTGTTCTG CAACGTAGCA AGCATCTTGG AGCTCCCTGG GAAGTTAGGA 2520 TCCTAGGCCT TCATCTCCCA GCCATTGTTC CTTTAAAACA AACAGTAGCA TAACGATTAG 2580 CATTTCTACA CTTAATCACA TTCAGTTCTG GTGGCTCCAG CCTGCAGTTT CTATGCTGAC 2640 AGTTGTTAGA TACTTCAGTT CTAAATGCTT CTCCCTTGCT TTCAGAATTT GCCATCTGGC 2700 CTTACCTCAC TCAGGTGGCC TTAGCGGTCT AGCCAAACTT CTTTCCTACC ATCTTATTTT 2760 TTAAAAATCT TTATACCTTC CTTCCTTTTC TTTCTACTTA CTGTCATCTC CTTCCTCTGA 2820 CCATCTAAGC ACAACCAGCT CTTCTTCAAG CTCCCTGCCC CACCAAAGCT ATCCACCTTT 2880 TAGGAAGACT CTTAAATTCC ATTTCTGCTA CTCACCAGCA GTGCATCCTT GGACAGTTTA 2940 CAATTTGCAC ATCCTCTTTG TTCTCCAGTT TTCCCATCTG TAAGTGGGGG AGTAGGAGGA 3000 ATGGTATCTC TTTTATGGGT TGTTATAGAA ATCAAATGAT TGATCCAGGT AGAGCCCTGA 3060 AAGCACTGTT TTACTGCCTA TTTGTGATGT TGTAAAAGAG TTGGTGGCTC ATTAGGGTAC 3120 CTGGCTAAAC ATCTAGTCAC ATGTGGTGTC CCCTGGCCAT GGCTGTGGCT GCCGCCATGT 3180 GAAGAGCCCT TGGAGGGCTC TGCATGTATT AGCACCTGCC AGAGAAAAGG ATGTGGGCAG 3240 AAGCAGACGT TTATGTTATG AAACAATGTG CTCCCCCGCT GATAAGTGGG ATTTCCCACA 3300 CACTATGGCA ATATATTGTC TTCCTTGGTG TCTCTGTGGC AGGGGGCACC TCTAAGCCAC 3360 CTGGCATCTT TTGCTTAACT GGAATCTGCA CAAAAGCAGA GAGTAAAGGC TGATTCCAGC 3420 TTTTTGCTAT CTTTGGTGTG TATGGTGGGG ACGGGGCAAT GGAAAGACTA GGTCTCACGG 3480 TTACATAGTG AACAGAAGGT TGCTGTGTCC TTTTTTGTTA GGACCAATAA CGTCTGTTTT 3540 AGAAAAGATC ACTTTAATGG CTATGAGAAC TGGTGATCCC AGTGCACATG TGGGTTGTGA 3600 CATGTGCTTG TCACTCCGTG TCCACCTCCC ATCCACCATG GCAGACCTTG AGCTTGGTGG 3660 AAGGGAGTCA GCAGTTCCCA GACACTAGTC TCGCAGTTGA GGACCTGGGG TCAATTCGCT 3720 TAATCTTTTC TGAACCTTAT TACTTAATTT GTGAAAAAGG GATAGTTGTA GATTCCTTAG 3780 AGTTCCTATG AGGATTAGAT GGGAATTGAA GTGAAGTGGC TCATACTAAG TACTATTTCA 3840 TTTGCTTTGA CACACACCTC TACACCCTTC ATTTCACAAG CAAAGAAGAG ATGGACTTGG 3900 AGTCGTGGTT GTCATTCACT CTTGTTAAGG GAAGAAGTGG GATAGGATAG TATGAAGTGT 3960 ATTGCCACCA CTTTTATTTC TGCTTATGTT CTCTAGGTTT TCATATGTAA TGGAATGGTC 4020 TCTTTTTGTC TAAAGTGTCC TCTTGTACAC GGGGGAGGAG TTTGTGTGGA AGATGTGTGG 4080 GAAGAGCCAC AGGTGCACGG GTCCCCTGTT GGCCAGGAGC CAGGGCCCAC AGGTGTCTTT 4140 GTTCCAGGTA CACACTTCTC TTGGAGTCTG TCACCAGGCT TGGCGCATTG CCCAAGATTC 4200 CAGCTCTTAC 4210
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