EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS179-01232

Organism

Homo sapiens

Tissue/cell

SkMC

Coordinate

chr1:65401180-65403180

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr1:65401625-65401646	CTCAACACCTAGGACAGCTGC	+	7.18
STAT1	MA0137.3	chr1:65403004-65403015	TTTCCAGGAAA	+	6.62

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_00278	chr1:65396713-65404604	Adipose_Nuclei
SE_11209	chr1:65397999-65403086	CD20
SE_18759	chr1:65398331-65402647	CD4p_CD25-_Il17-_PMAstim_Th
SE_46185	chr1:65398049-65401806	Osteoblasts
SE_68419	chr1:65353166-65432877	TC71

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I064935

chr1

65401284

65401683

Enhancer Sequence

GCCATGTTGG TCAGGCTGGT CTCGAACTCT CCTGACCTCG TGATCTGCCT GCCTCGGCCT 60
CCCAAAGTGC TGAGATTACA GGCGTGAGCC ACCGCACCCA GCCCATAATT CATCTTTAAA 120
CCAACTCTCC AACAACCTGT CCTCTTTCCT CCTACTCAGA CTGAATGAGA AGTCTGGTCT 180
TGGCAGTCCC TTGATGTTTA TCCAGCCTTT CCTGCTGTGA CAGAATACTT GATGTGCTAC 240
CACAGAACTG CTTGCAACGC TGACGGGTCA TCTCTGATGC TAAGGGAGAA GAAAAGGGAA 300
AGTCCCTGGA GAGCCACCAT ATTGAGTCTT TACAATTTCA TCTAGTGGAC TGTGGAGCCA 360
TAAATGGTGC ACAATAAATC CAGGAATGCT GGAGGGCGAA CTGACAGGAT CCAGTAGGAA 420
CATCTTAGAA CAGACCGGTG TGTGTCTCAA CACCTAGGAC AGCTGCCCCA CAAACAGACG 480
GTCCAGGGAC ACACCCTTGC CCCTCCCCAT TTCACAAAGC TCCCATGGGG CCTTGTCTCC 540
CAGCCTCTAG CCTTACTCCA GTGTCAATAT GGGATCCGGC AGGAAGAGGC CAATGTGCAA 600
TTACTAAATA AAACTCCTTC ATTGACTGAG TTGCCTCCTC TCCTTCCAGG CTCAAGATCA 660
AAGATTAAGC AACAGAGGAG AGGTGGAAGT TTATCAGAGA ATCAGGATTT CAAGGTTGGA 720
ATGGACTCTA CAAAACATTC ACCCTCCTCC TCCATGGCAA TAACTATCCA TACTTTCATT 780
ATTAGGCCAA ATAAGCCTCT ACATTTACCC TCAACTCCAC AGGCCCATGG ATGGACTCTA 840
AGAGTATTTG GTATTTAAGA TAAAAATACA AATTTGACAC AGTGCACCCT CCAATGCAAG 900
GTAGGAATTG GTGGGCACCT TGAAAGAAGT ATCCTTGTTA AACCTCTAAG ACTCTTGTAT 960
TGTGGAAGAA TTAATTCATT CTTGGGGAAA TCCAGTTATT TCTCCCATGA AGACAAAGAG 1020
AGGTACCTTA TGTCACTCAC CCATCACCTG TCTAGACACC CAGGACTTTC ACAAGTATGA 1080
CTGGAGAGGT GAGGCCAAAC ACAAGAGCTG AGAAACAGCA CAGCCCTGTG ACCAGTAGCC 1140
AGGGTGTAAG CCCAGCTCCA CCACTTACTA GCTCTGTGAT CCTAAAAAGC AGGAAAACAC 1200
TAGGACCTAC CTACCTCATT TGCTTGTAAA AAGATTAAGT TAGTTAATCT ACTTAGAACA 1260
CCATAAGTGC TATATTTCTT CCATAAATGA AGAGGCTAAG CCAACGTTTC TTTGAAACAT 1320
GGTATCCCAC GTTGGTGAGA ATTTCCAATG TGACAGCAGA AAACAGTAGG TTGTACCATA 1380
TGAAACTGCC AATATTTGAC CATTTTTATG TACAAAAATG GCAATTTTAT ATTAATAAAT 1440
CAAATATATG TGAAAAAGAA TACAAAGCAG TGCATTTACA ATCATCCTAA ATGCCTAAAG 1500
CTTAGGCCTT TTACAGAAAA TATTTCAAAT GACTGTTTAA AAAAAAAAAA AAAAGGATCA 1560
ACTATTTGTA TGGGGCTAAT CCTCCCCACC CCCAGTTTGG TCTACAGGAC CTCATGTAGA 1620
TTGAGCAACT TTGGCTATTT GGGTAGCTGA TCCACTGCCA AGCTGGCTCC CAGCTACCAC 1680
CTGTTACTTT GACAACTCTA GCTTCAGGGC TACCAGGACC ATTTGCAAAA CTTACACCCA 1740
CAGAAAACTC AAAGTCTCCA GAGGCATAAG CTCCAACCCC CAGAGAGCTC CACAGCATTC 1800
TTCTCCTTCT AGTAGTACTT TTGGTTTCCA GGAAAATCAT CTCATGCTCG GGCCACAGTC 1860
ACAGTCCTGA CCAGCACCAT AGAAATTTCA GCCATTATTC TAGTTGTATG GAGTCATTCA 1920
AAATACTAAT TCCGAAAGAA GTTTCAAAGG TCCAACGCCG AGCATCTTTT ACCTTTGCTA 1980
ATTTTTCCAT AAATTGAAAG 2000