Tag | Content |
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EnhancerAtlas ID | HS179-00809 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:43414660-43416460 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2C2 | MA0504.1 | chr1:43415014-43415029 | TGAGGTCAGAGGGCA | + | 6.95 | Nr2f6(var.2) | MA0728.1 | chr1:43416427-43416442 | GAGGTCAGGAGTTCA | + | 6.22 | RARA(var.2) | MA0730.1 | chr1:43415171-43415188 | TGACCTTAGGGTGACCT | - | 8.36 |
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| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_02447 | chr1:43414805-43416460 | Astrocytes | SE_05390 | chr1:43414707-43416429 | Brain_Cingulate_Gyrus | SE_10377 | chr1:43414592-43420061 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_13825 | chr1:43414724-43417463 | CD34_Primary_RO01536 | SE_14471 | chr1:43414700-43422138 | CD4_Memory_Primary_7pool | SE_20345 | chr1:43414766-43416518 | CD56 | SE_20799 | chr1:43414730-43416336 | CD8_Memory_7pool | SE_22754 | chr1:43415217-43416365 | CD8_primiary | SE_23189 | chr1:43414912-43415861 | Colon_Crypt_1 | SE_23904 | chr1:43415177-43415524 | Colon_Crypt_2 | SE_26580 | chr1:43414679-43416464 | Esophagus | SE_33837 | chr1:43414630-43417352 | HCC1954 | SE_36013 | chr1:43414709-43416491 | HMEC | SE_37191 | chr1:43414563-43417036 | HSMMtube | SE_39883 | chr1:43414765-43416522 | K562 | SE_41038 | chr1:43414730-43416507 | Left_Ventricle | SE_41620 | chr1:43414783-43415774 | LNCaP | SE_50202 | chr1:43414810-43415792 | Sigmoid_Colon | SE_57417 | chr1:43415150-43415765 | VACO_503 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43414873-43416676 | HSMM | SE_64340 | chr1:43414814-43416461 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | CCCAGGAGGC AGAGCTTGCA GTGAGCTGAG ATCGCGCCAC TGCACTCCAG CCTGGGCGAC 60 AGAGCAAGAC TCTGTCTCAA AAAAAAAAAA AAAAAGTACA AAAATTAGTG GGGTGTGGTG 120 GCACATGCCT ATAATCCCAG CTACTTGGGA GGCTGAGGCA GGAGAATAGA ATCACTTTAA 180 CCTGGGAGGC GGAGGTTGTA GTGAGCAGAT ATTGCACGAC TGCATTCCAG TCTGGGCGAC 240 AGAGTGAGAC ACTCTCAAAA GAAAAAAAAA TAAGACAGCT TTGGCTGCAA TAAGAAAGAA 300 AGAAGCTCAA GAAATTGCAG ACTGCTGTAA CATCGGCACT TGACAGGAGG CACCTGAGGT 360 CAGAGGGCAG GTGCCCAGCC TAGCATACAA ACAAAAGCCA GGGTTGGGAC TAGAGTTGTT 420 TGGTTTCCTA GCCTGGCATT CTACCCTCTG ACCGGTTCCA TCCTGCCAAG CCTTTTAAAA 480 AAGAAGAGTG ATGGACTAAC AGTCCAAAAC CTGACCTTAG GGTGACCTCA AGCATTAAGT 540 GCTCCTGAAG CCACTTCCTT TAAGCCTTCC AATGATATCA AGACCCTTGC ATGACTGAAC 600 CTCCAGACAC CCCTGGTTGC CCTCGAGGCA GAAGGCACTC GCCAGTCTTC AAAGTAGAAC 660 TGAGAGGAGG GGGCTGGTGC ATTTAGCAGC AGCAGCAGCA GCGAGCTGAG GCACCCTGCC 720 AGAGGCTGCT CACACATTCT GATTAACCAC CATGAACAAG CTTTTGGGGA GCGATTACTC 780 CCTTTTCACA GATGAGAAAT GAGAGAGAGG GAAAAGCGCA GAACCAGGGG ACTCTAGGCT 840 TCAGGGAAGT TTCCAATTGG GGGTCTCTGA TGCCAAATTC TATGGCTTTC CTGCTTAGGT 900 CCTCCCCCTT GTTTCCGGGT ACTGGTCCCT GAAGGAAACA AGGTTTCTAC CTGGTGCTTT 960 CTATGTAGGT CAAATTCCAT AAAAGCAACT CTCTGAGCCT TGCCCACTCT GAGCTGAGAC 1020 AGCCCGGGCA CAGGCTCAGA AACCTTTGGG CCACTTTGCT GCATTTGCTA TAAGCCAAAG 1080 TTGGCAAACT ATGGCAGCTA AGAATGAGTT TTACATTTTT AAGTAGCTGG GGAGAAAAAA 1140 AAGACAATGA CTAATATTTT GTGATATGTA AGAATTATAT TAAATTCACA TTTCAGTGAC 1200 CATGAATAAA GTTTTATTGG AACACAGCCA CACTCATTTG TCTACAGCTG CTTTTGTACT 1260 GCAACAGCAA AGCTGAGTGG CAGGCCGAGA ACTACATGTC CAACAAAGCT GACAATATTT 1320 ACGCTCTATC TGGCCCTTTA GAAAAAAGTT GATCGGCCTC TGCTTTAAGC CCCACGTCCC 1380 CTGAGCTAGC TGCCCAGCAT TCTCAAAGCC TTCCAGGCAA AACCACATCC TCCCTAAATA 1440 ACCGAAAAGG TATGCATCCT ATTATGGAAT GTTAAATGTA AATGGCTCCT TGGCCATGTG 1500 TGGGTGTGGG GCCAGGATCT GGACCCTGGG GAAACTGACA CCCCTGAGAA GATACACATT 1560 TGGTGGTGAG ATGGGCAATA ATTCAACTAA GAGAACATTA ATTTGGTAAG ATTGGGCACA 1620 TGCAAAGTTC ACTGTCACTC TCAGCAGACA CATTTAAGTC CCAGCTCCTC CACTTGTGTG 1680 ACCTTAAAAA AGTCCTTTCC TGGCTGGGCA TGGTGGCTCA CGCCTGTAAT TCCAGCACTT 1740 TGGGAGGCTG AGGTGGGCGG ATCACCTGAG GTCAGGAGTT CAAGACCAGC CTGACCAACA 1800
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