Tag | Content |
---|
EnhancerAtlas ID | HS179-00717 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:39736800-39739360 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr1:39737851-39737862 | ACAGATAAGAA | - | 6.14 | Gata1 | MA0035.3 | chr1:39737851-39737862 | ACAGATAAGAA | - | 6.62 | IRF1 | MA0050.2 | chr1:39739263-39739284 | ATTTTGTTTCTTTTTCTTTTT | + | 6.8 | NR2C2 | MA0504.1 | chr1:39738088-39738103 | GGAGGGCAAGGGTCA | + | 6.2 |
|
| Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
SE_11519 | chr1:39737327-39739322 | CD20 | SE_13363 | chr1:39737120-39738383 | CD34_Primary_RO01536 | SE_18276 | chr1:39737303-39738655 | CD4p_CD25-_Il17-_PMAstim_Th |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 39738000 | 39738200 | chr1 | 39738878 | 39739141 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I039271 | chr1 | 39737053 | 39739052 |
|
Enhancer Sequence | TATTCTTGCA TTGCTATAAA TAAATACCTG AGACTGGGTA ATTTACAAAG TAAAGAGGTT 60 TAATTGGTAT ACAGTTCTGC AGGCTGTACA GAAAGCATGA TGCTGGCATC TGCTCAGCTT 120 CTGAAGAGGC CTGAGGAAAC TTACAATCTT GGTGGAAGGC AGAGGAGCAG TAGGCATGTC 180 ACTTGGCTAC AGCAGGAACG AGAGGTTGTG GGTGGGATGT GCCACACACT TTTAAATGAC 240 CGAATCTCAT GAAAACCCAC CTACCCTCAC GAGAACAGCA CCAAGGGGAT GGTGCTAAAC 300 CATTCATGAG AAATCCACTT TCATGATTCA TGATCCAGTC GTCTCCCACC AGGTCCCACT 360 TCCAGTATTA GGGATTACAA TTCAACATGA GATTTGGTAG GGACACAGAT TGAAACCATA 420 TCAACAAGTA TTTGGGTTTC ATCAGATAAA AAAGAATGTC AAAGTCAACT TTTATCTTGT 480 AAAAGTTGGA ACAGATAGAG TAGTTGGGGG TAAAACCAGC TGTGGAACTG ATTGTTGTAC 540 AACTGGCATT AAAATTGAAA TTGTGTAGTC ATCATAACAT TATAGGACAC ATGCTTGTAA 600 CTGAGTGTGA GATTTTCAGA AATTTGGCAT ATAAAGTTTT AGGAACTCCT AGTAAAATCA 660 ATCCTAGATA ATAGACCATA GATAGCAATG GCACCTTTGT ATGGGCTGGA TCTCCACACT 720 GGCAAGGGAA TGTTCTGCAT GAGTCTGTGA GGAGTCTTAA AGAAAAGATT GTTAGGAGAA 780 ACCTTTGGAC CATGATCTGT AGTGTGACCA TATTGGCAAC AGTATGATTC CTTTGCTGTT 840 CAGTATGATT CAAATTGGTG TGTGGCATTT TCTGGGTAGC CAACCTCTGC ATCTATTCCT 900 TCTACCTTTT CACTGCAGAC ACAGTCATAC TACTTATGTA TAGCCAAGGC TGAAAAACTA 960 AGTGACCGAG TCTCAGCTCA GACACCTGGC ATATTTCCAG GTTTTGTGTC CATCATGTGA 1020 TACAGGGACC ACAGACTCAC CATCCTATAT GACAGATAAG AAGTAACTTA TCAAGATAAG 1080 TGTGACATTC CTTCAGAATG AAAGTCCTTA AGGCCAAGAG GCTGCAACTC TCACTGGTCC 1140 CTGAAGGAAC TGTCTTCAGG GAGCTGCTCC CCTCCCTAAC AGGCTGTTCA CAGGCTTGAG 1200 GACAGTAGCA GCCAGAGAAA CAGAGAGGGC AACGCATACT GAAACCGATA GGCAGGGCAA 1260 GAGCATCTCT GCTAAAGTGG GAAAGCTGGG AGGGCAAGGG TCAGAAGAGC AGCTGCTGCT 1320 GTTCACACAC CAACTCCTGT CTAAACAGGA GACAGCTGGC AGTCCAATTG AGTTGTTTTT 1380 TGCTTGCTTT TTTGGTGGTG GTTTTGTTTT TAATATGTCA GAGTAGTAAC TATCCTCAGA 1440 AAATAATTTG AGTTCCAGCC AGACTGTCTC CTCTGTTGAT TAGTCCAGGG CTTGTTGATG 1500 AGAGTGAGAC CAGGCTATGG ATAGACATAA ACTTCACCAT GGGTTTTGTT GCTTTTTAGG 1560 ATGGAGAGAA ATGGGAACTG ATTGTGCTTC TTGCTAGTGT AGGGTTTAGA TAGTAGAATA 1620 TACATGATCT GCTTTTCTAT TCACCTAGTA CAGTTAATAC TTCTTTTGTC AAGAAATAGT 1680 TAACACAGAA GCAAGATGAC AAGGGTCAGC TGACAAATAT GTTTTCAGAA TGACAAGTAG 1740 ACTAGGATTT GGAGCTGGAT GGGAACAGGC TAATAGCAAT CGCTCTTTGA TGTCAGACAA 1800 AGGCCTTCTT CTCTGGCCCA TTTCTTCTCT CAGGACTCCC TATTCCCAGC TGCTTTCAAT 1860 ATCCATACTA CTAATACCTG GCTTATTTCA ACAAGGAACA TTTTTGAAAA TCCCTTCCTC 1920 CTCCCCATCT TGACTTCTGC TGCCAAGCTC CTGCCCACCT TGTTAGCGAA TCCCATTTAA 1980 TGAAGCATTT ACCTCTATAC CAATTTTTTT TTTTTTTTTT TTTTTTGACA CGGAGTCTGG 2040 CTCTGTCACC GAGGCTGCAG TGCAGTGGTG CGATCTCGGC TCACTGCAGC CTCTGCCTCC 2100 CGGGTTCCAG CTATTCGCCT GCCTCAGCCT CCCGAGTAAC TGGGATTACA GGCGCCCGCC 2160 CCCACCACGC CCAGCTATAT ACCAGTGTTC TTGCCACAAC CCTTCGAGTC TCTACAATTT 2220 TAGGTGAATA GTCAGATAAC ACTGGGGCCT AGAAATGATA AGAAAGAGGT TGGTTGGTGT 2280 ATTATCTTCT GGGCTCAGCC TTTTCAGTTT ACAAGTATCC CTCTCCCAGT TTTCCTTTTT 2340 AATTATAGGG AGAGTTGTTT TACTAATACT GGCTTTGTAC TGAAAGAAGA AAGCAAAATT 2400 AACCAGATGA CACTATTGGG GGAATGCAGA AGGTAAAGTT ATAGTTTAGA ACTTTAAGAA 2460 AGGATTTTGT TTCTTTTTCT TTTTTTTTGA GACGGAGTCT TGCTCTGTCA CCCAGGCTGG 2520 AATGCGGTGG CCCTACCTCA GCTCACTGAA CCTCTGCCTC 2560
|