Tag | Content |
---|
EnhancerAtlas ID | HS179-00703 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:39606650-39609390 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr1:39608709-39608721 | AAACAAACATTT | - | 6.27 | RORA(var.2) | MA0072.1 | chr1:39608627-39608641 | CTGACCTACTTTTC | - | 6.66 | TBXT | MA0009.2 | chr1:39607083-39607099 | TAGCATATAGGTGTTA | + | 6.01 | TBXT | MA0009.2 | chr1:39607083-39607099 | TAGCATATAGGTGTTA | - | 6.07 |
|
| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_00416 | chr1:39607432-39609721 | Adipose_Nuclei | SE_02052 | chr1:39608108-39608826 | Aorta | SE_25799 | chr1:39606480-39609540 | Duodenum_Smooth_Muscle | SE_32006 | chr1:39608179-39608893 | Gastric | SE_35822 | chr1:39605780-39609757 | HMEC | SE_36947 | chr1:39605532-39611756 | HSMMtube | SE_42256 | chr1:39606816-39607217 | Lung | SE_42256 | chr1:39607415-39608945 | Lung | SE_42256 | chr1:39608965-39609690 | Lung | SE_45768 | chr1:39607341-39608639 | Osteoblasts | SE_47164 | chr1:39606982-39608398 | Panc1 | SE_51765 | chr1:39606612-39609191 | Skeletal_Muscle_Myoblast | SE_54583 | chr1:39606659-39609601 | Stomach_Smooth_Muscle | SE_63563 | chr1:39606612-39609205 | HSMM | SE_64261 | chr1:39605649-39609602 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 39606800 | 39608800 | chr1 | 39609269 | 39609360 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I039139 | chr1 | 39605512 | 39609683 |
|
Enhancer Sequence | TAACTAATTT AATCCTTAGA ACCTATCTCC ATTTTACACT GGAGTAAACT GAAGAACAGG 60 AGGGCATAGT GATTTGCCCA GGGACACACA GCTGTTAAGC AGCAGAGTTA GGTTTCACAA 120 TTTGCTCTAG AATTCTCATG TACTCAAACA TTATGCTATA ATCAGTTGTT CATAATATTT 180 TCACGCTGTT AAATTCCTCC TGAATGCCTG TCTGTCTTGG GTGTAGCTCA AAGAATGAAA 240 AGCAGAAGCA GCATAACTTG TTGAATATAC TCTTGAGCCT GCGTCAGAAT CACCTGCAGG 300 GCATGTTAAA ACACAGATTG CTGGGTCCCA TCCTCAGTTC TGATTCAGTA GGTCTGGGGT 360 GGGGCTTGAG AAATTATATT TCTAACAAGT TCCCAGGAGA TGCTGATGCT GCTGGTCTGG 420 GGACCACTTG GTGTAGCATA TAGGTGTTAA GAGCATGGAC TCAAGCTGCT GAGGTTTGAA 480 TCTCAGCTCT GCCATTTATT AACTGAACTT GGGCAAGTTC TTGAACCTTT CTGTGCTTCA 540 GTTCTCATCT GTAAAGTGTT TTACTGTTAC CACATATATC ATAGGATTCT GACGGAGATT 600 GAATGAAATA ACATGTAAAG TGCTTAAAAT GGTGCTTGGT TTGTAGTAAG CATGCAGTCT 660 TAGCTACAGT AATGGGGATA GGACATGTTT CTTGCCTTGT AGATTTTAGA GTCTAGTTAT 720 TAGACTTAAA TCTAATAATT TTAAAAAGTA CAAATTCAGG TATTAGTTTA CATGGTTCTG 780 ATTCTACCTT AGATTTGGAA AGATGAAATG CGTGTATCTT GGGGGATATG GTGGGTAGTG 840 GGAGACCAGG AGGAGGAAAG GTACATGAAA CTAGAAGATA ATGGAAAGTT ATATAGTCAG 900 AATTTAGAAA GGTTGGAATT GCCAGTGGTT TTGGTATTAT TACCTGAGAA CTTGAGGGAG 960 ATAGAGGAAG GTGCCTGTGC TCTCTGTTTG CCAAAGAGAT AACTGACTCC TTTTCCCATT 1020 TCTCTTTCTT AGAGCTGGTA TCTGGTCTGC AGGCAGTTCC GGCAGCATTT GCTTTTTGTG 1080 GGGAACAGTG GCTAAGGAAG TGATTTGCTA CTGGCTTCAG AAGTTGGGCT CTGCTGCCTT 1140 TATCCTCCAC AGCTGCCTCA CATAGTTTTG ATTCTTCCTG AGAAAGGCAG TTGTTAGGTT 1200 TGGAAGTCTT CAGATTCCAG AGACAGCTGG ACAGCTGACC CTCTGGTAGC TATTTCCCAA 1260 ACTGCCAGCC TCCTGTTGCC TCATCTCCCT GGGCCCCTTC TTTTTTGCTT TGAAGCAATA 1320 TCCTATATTT AGTGAACTAA CCAATTTGAG GTTAGAGGAA ATTTGATGGG GGAGTCTCTC 1380 CCACCTTAAA ATCCTGGATG GATGGAGTAT TTGGGCCCAG GAACAAGATG TATCCTGTTA 1440 AAAAAAATTT AACACCTTCA TCAAGTATAC TCCAAATGAC AGCTTACAGT GCTATGAATG 1500 TACCTCTAGC TCATGGGTAA GGAGCAGTGT TTATTTTTGG GTGCCCTGAA GAAAATATTT 1560 GGGGGAAGGA GTGGGGAGAA GCTCAGGCAG CTCCATTTAT GGTTGAGCAA TGCTTGGTAT 1620 TCTACAGAAG GGACCATATG GACAGTGGAA GAGAGTTTAG CATTCTGATT GTTCACCTCT 1680 TGCTCCTTCC ATTCTGATGG CTAATTAGGG ACACCTCATT AGCTATCAGA GTGGAACAAG 1740 TATTTGCCAG GCTGACATGA GCCTCAGCCC TGCATCCTGC ATCTTCTGCT TTCCCAACCT 1800 GCTGAGTCAC CACCTAGGAA TGGCAGTAGC CAGGTTACCA CCTGGAGCAC CTGGAGCACT 1860 CTTGGCATAA TGCACTGTTG ACTGGTTTTG GTCTCCTAGA CACAGCTTGG GCCTCTCCAA 1920 GCCTGTTGGA GTGATAGGCT GGGTCTTAGC TCTCCTTCCA GCTTGTTCCA CAAGGCGCTG 1980 ACCTACTTTT CAGGGACAAT TAAGTGTTTG TGAGCAAAGG AAGGCGGTGA CCCGAGTGAA 2040 GGTGAACCAG AGCTGCATTA AACAAACATT TGGAGTCACT TTTTCTATCT TACACAGGAG 2100 GGCCCATCTC AGTCCAAATG GAATGGCAGA TCAGGCTGAT TGTGGTAGCC ACATTCTAGA 2160 TGCTTATCAA GATAGTCAAC TAACCCTTGA ATTTTTATTC TTTCTATCAA TGTACCTTAA 2220 TATCAGAAGT TACTTTTCAT AATCATTGTA CCCCTTGTCT GTGGGCTATA CGAAAAGATT 2280 TGGAAGCAAG TTGGGGCTCT TAGAGTGAAT TATTGATACA AGCTAGCTTT TGATATACCT 2340 TTTGGTGTAT CAAAGATACA CTTTCTGGTG GCAATGTCTG GTTCATTTGT AACATCTTGG 2400 AGAGGATTGG AATCTCTTTT CCTTTTTGTA TCAGGCCAGG ATAATAGGAT AGAGGAGAGG 2460 CCAGATCTGT AGAGAATGAG CAAGTGGCTT GTTTAGGGTT TCCTGCCCTT GTGAGGTAAG 2520 GGCTCAAGGA TTAGATTCAG TCTTTCCATT TGCAGTGAAA GGAAGTAAAC TCACTTTCCC 2580 ACCCTCATCC TGGAGGTTAC TTATGTTATT TGCAGACCCC AACTTCTGCC TCTCTGTTAA 2640 GTATACTTCT TATGCAGGTT GCCCTTACTG TTACATCTTA CCACTGGGGG AAAGATCCAA 2700 GGCTCTGGGA AGGACAGTGA CAGTTGTCCT ACATTGGCTA 2740
|