Tag | Content |
---|
EnhancerAtlas ID | HS179-00326 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:19768400-19771120 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr1:19770936-19770948 | AAACAAACAAAC | - | 6.32 |
|
| Number of super-enhancer constituents: 43 | ID | Coordinate | Tissue/cell |
SE_01631 | chr1:19768525-19769726 | Aorta | SE_01631 | chr1:19769912-19770560 | Aorta | SE_02919 | chr1:19768674-19769758 | Bladder | SE_02919 | chr1:19770008-19770473 | Bladder | SE_03519 | chr1:19768513-19769321 | Brain_Angular_Gyrus | SE_04046 | chr1:19768425-19769911 | Brain_Anterior_Caudate | SE_04046 | chr1:19770459-19771339 | Brain_Anterior_Caudate | SE_05077 | chr1:19767562-19771543 | Brain_Cingulate_Gyrus | SE_05833 | chr1:19758978-19771689 | Brain_Hippocampus_Middle | SE_07251 | chr1:19767429-19769978 | Brain_Hippocampus_Middle_150 | SE_08066 | chr1:19767543-19769814 | Brain_Inferior_Temporal_Lobe | SE_18410 | chr1:19770426-19778429 | CD4p_CD25-_Il17-_PMAstim_Th | SE_25786 | chr1:19768369-19769945 | Duodenum_Smooth_Muscle | SE_25786 | chr1:19770425-19771422 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19768652-19771290 | Esophagus | SE_28668 | chr1:19768643-19769535 | Fetal_Intestine_Large | SE_29645 | chr1:19768393-19771200 | Fetal_Muscle | SE_31447 | chr1:19768651-19769952 | Gastric | SE_31447 | chr1:19769977-19771282 | Gastric | SE_39233 | chr1:19768647-19769703 | IMR90 | SE_41031 | chr1:19768675-19769779 | Left_Ventricle | SE_41031 | chr1:19769933-19771117 | Left_Ventricle | SE_42185 | chr1:19768670-19769813 | Lung | SE_42185 | chr1:19769878-19771065 | Lung | SE_44300 | chr1:19768410-19770571 | NHDF-Ad | SE_45110 | chr1:19768391-19770663 | NHLF | SE_45720 | chr1:19760211-19770269 | Osteoblasts | SE_46635 | chr1:19768701-19769554 | Ovary | SE_46635 | chr1:19769944-19770523 | Ovary | SE_46635 | chr1:19770618-19771181 | Ovary | SE_47234 | chr1:19762903-19786782 | Panc1 | SE_48688 | chr1:19768709-19769719 | Right_Atrium | SE_50058 | chr1:19768574-19771344 | Sigmoid_Colon | SE_51211 | chr1:19768456-19770866 | Skeletal_Muscle | SE_52345 | chr1:19768588-19769821 | Small_Intestine | SE_52345 | chr1:19769886-19771330 | Small_Intestine | SE_54550 | chr1:19768282-19770728 | Stomach_Smooth_Muscle | SE_56083 | chr1:19768377-19769830 | u87 | SE_56083 | chr1:19770659-19771399 | u87 | SE_62519 | chr1:19761354-19815005 | Tonsil | SE_65446 | chr1:19769702-19771171 | Pancreatic_islets | SE_67779 | chr1:19768377-19769830 | u87 | SE_67779 | chr1:19770659-19771399 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 19768744 | 19769574 | chr1 | 19770116 | 19770291 |
|
Enhancer Sequence | GCTGAAGCAG GAGAATTGCT TGAACCGGGG AGGCGGAGGT TGCAGTGCGC TGAGATTGTG 60 CCACTGCACT CCAGCCTGGG CGACAGAGCA AGACTCTGTC TCCAAAAAAA AAAAAAAAAA 120 AAGCACAGGA GAGGTATCCA CAGCCCTTAA AAAGCATCAG TGATAGCTCC AAATGCTGAA 180 AGATGAAGGG CTCTGTCATC TTTAAACCCT GTTTGTGATT TCCAGTTTCA ATGAGCCTGT 240 TACATTATTA CTGTAATCCT AAAAAAAAGG CTCACAAATT TTTTAACTGA CAATTTTCAA 300 AAAACAAAAG TCAGTGCTTA GTCCTGTTGT TTACATCGGG TACACTATTA GAATCTGGCT 360 TTCAGAATGG AGAGACCCAG ACTGCTCATG ACAATTACAC CAGAGGATCT GATTCAAACT 420 GATTCGAGCT GGGGAGTGGG GGGGCGTGGA GTGAGCAGGA GCAGCTGAAA CAACGCTGGG 480 CACGGAGGAT AACTGCTGAA GTTGAGTGAC AGATAATTGG GGGCTCATTA TATCACGTGC 540 TTGAAATTCT CTGTAACAAA AAGTTCTCTG AATTTAAATC AGGCAACACT AACTTAAAGT 600 TCCCTTACGG TAAGGCCTGG TTGCCACCTA CTCCTAGGCT CTTGCAAGCT TTAAGGCCAG 660 TATGAGTCGA ATGTTTACTG GACATTAGGC AGTTTTCTCA CACTCACACT CGCACTCGGT 720 CCAGGAAAGC CCTCCCGGGG CAGGGGGCCA AACGAAACCC TAAATGCAGC TTTGTAGCAG 780 CCCAGCTGCT CTGAAGGACT GAAAAACACA GGGTCCTCAA AAATCACCAA AAAACCCTTT 840 GGCTTGGACA GCTTTTCCTT CCCTGGCTTC CTGTAAAGAT GCCGCAGGCT CCCTAGAATC 900 TCCAACTCCG GTTTGTTTTT AGGAAAGTTC CGTTGCTCCT GCCTTCAGCT TGGCTGCCTA 960 CTCCACGTTA CACAAATACA CCTCCTCTGT GCGGCGCAAA CAACCTCTAC GCCAGTGGTG 1020 CTGAAGGAGG CCTTCGCTAC TTGCATCCAT CCTATCAGCG TCCAGAGGAG TGAACACGTA 1080 GATGTCTATC ACTGACTTCA TACCCTTCCC CCAACAAAAA AACCTTAAAA TCATAATTAC 1140 ATCCTTCTCT ACAATGACCT TTCTTACTTT TATAACAGGA TTTTAAAAAT CCATTCCTGG 1200 CCAGGAGTGG TAGTTCACGC CTGTAATCAC AGCACTTTGT GAGGCCAAGC TGGGAGGATG 1260 GCTTGAGCCC AGGACTTCCG AGACCAGCCT GGGCAACATA CTGAGATCCC ATCTCTACAA 1320 AAAAAAAAAA TACAAAAAAA TTAGCCAGGC ATGGTAGCGC GTGCCTGTAG TCCCAGCTAC 1380 TCGGGAGGCT GAGGCAGAAG GATCACCTGA GCCTGGGAGG TCAAAGCTTC AGTGAGCTAT 1440 GATCACACCA CTGTACTCTA GCCTGGGCAA CAGAGAAAGA CCCTATCTCA AAAAAATAAA 1500 AATAAAAGAT AAAAATCCAT TCCTTTTTTT AAAATAAGAC ACTGTATAAT ATTAATATAG 1560 CCACGGCAGC ACCACTGGAC TTACGGCCTG GCTTTAGGGA GACCTCAGAC TGTTGACGTC 1620 AGTTTCTGGT CCACAGCTGC CTTGGAAACC TCCCTGAGCC AAAATTAAAA CAACAGCTTT 1680 CTCTCAGGGT ATGCTTAAGT TATTGTTGTT GTTGTTGTTG TTTTAAAAAG AAAAAAAGAC 1740 AACAGGTTTG ATGTGACACT CAGTGTCTCC GGTGTGCCAG GCACTGTGTC AGGTACTTTA 1800 CAAACAAGGA AAGCAAGGCA CAGAGAGGCC AGGTCACCTG GGCAAGGCCG CCTGGCAGAT 1860 GCTGTGTGTG GCCGCAGAGT GAGGCATGTC CCAGACTCAG CCTTCCTCAC CAAGAGGGAC 1920 TCAAAGCCTT CTGGGGCACT CTGTGATGAA AGCTATGGGC TCTCTCCCCA GGGAGTGCAC 1980 ACACACAAAA GTCTGAATGA AATATCTGGT GGGTTCATAG TGCCCCTCTG TTCCCCAAAC 2040 GTCCCCTCTG GTTAAAAAAA CTCTATTCAG GTGAAACCCT GTCTCTACTA AAAATACAAA 2100 AATTAGCCGG GCGTGGCGGA GCACGCCTGT AATCCCAGCT ACTCAGGGGG CTGAGGCAGG 2160 AGAATTGCTT GAACCTGGGA GGCAGAGGTT GCAGGGAGCA GAGATAATGC CACTGCACTC 2220 CAGCCGGGGC AACAGAGCCA GACTCCGTCT CAAGGAAAAA AAAAAATTCT ATTCAGATTT 2280 TCATCAATGA AGAGCTTCAG CAGGAGTGTC TCCCATAGAA AGAGGCAGGT GTGTCTCTGG 2340 CCTCAATCCC TCTCTCTCCT GAGGTGTACA TGGCCCCAGG GCTTGCCCCT CCATCAGTCT 2400 GCAACACCCC CCAGCCCTGA GGTCTCAGAC ACCCAGCTGC CACCTCCCCA CCCTGTGACA 2460 ACTTGGGCTT GTATCTTATT AAAACACTCT AGGGTCCAAC CCTCTTAAAA CAATGAAAAC 2520 ATTTTCTCAC TCATATAAAC AAACAAACCT TTACTGAAAA CTAATGACGA ACACAAAGGG 2580 ACTATTTACA GAAAACAGCG TGCCTAGCCC CATCTAGATT ATAAACATAA CTGCACACTG 2640 GCTCTAAGGA CCCTGCCATC TTCCCAGGCC CTGGCCTGGC TGTTCTGCCA CTCCCCACCT 2700 CATGCCTGAA ACTGACACAA 2720
|