Tag | Content |
---|
EnhancerAtlas ID | HS179-00325 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr1:19755060-19757920 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Sox3 | MA0514.1 | chr1:19756464-19756474 | CCTTTGTTTT | + | 6.02 |
|
| Number of super-enhancer constituents: 32 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19746887-19757387 | Adipose_Nuclei | SE_01631 | chr1:19755026-19755747 | Aorta | SE_01631 | chr1:19755843-19757681 | Aorta | SE_02919 | chr1:19755911-19756933 | Bladder | SE_04046 | chr1:19756053-19757455 | Brain_Anterior_Caudate | SE_05833 | chr1:19750586-19757279 | Brain_Hippocampus_Middle | SE_09593 | chr1:19755451-19756990 | CD14 | SE_18410 | chr1:19754667-19757430 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19755104-19757108 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23237 | chr1:19755928-19757811 | Colon_Crypt_1 | SE_25786 | chr1:19750802-19758037 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19754835-19758103 | Esophagus | SE_28668 | chr1:19755603-19757198 | Fetal_Intestine_Large | SE_29645 | chr1:19755678-19757560 | Fetal_Muscle | SE_31164 | chr1:19754803-19757992 | Fetal_Thymus | SE_31447 | chr1:19755938-19757724 | Gastric | SE_41031 | chr1:19755895-19757535 | Left_Ventricle | SE_42185 | chr1:19755689-19757735 | Lung | SE_45110 | chr1:19755943-19756940 | NHLF | SE_45720 | chr1:19751083-19757454 | Osteoblasts | SE_46635 | chr1:19755110-19755480 | Ovary | SE_46635 | chr1:19755894-19756886 | Ovary | SE_47234 | chr1:19755677-19758314 | Panc1 | SE_48688 | chr1:19755923-19757600 | Right_Atrium | SE_50058 | chr1:19754772-19755839 | Sigmoid_Colon | SE_50058 | chr1:19755847-19757828 | Sigmoid_Colon | SE_51211 | chr1:19755657-19757588 | Skeletal_Muscle | SE_52345 | chr1:19754876-19757871 | Small_Intestine | SE_54550 | chr1:19750611-19758089 | Stomach_Smooth_Muscle | SE_56083 | chr1:19755047-19757873 | u87 | SE_65446 | chr1:19755872-19757833 | Pancreatic_islets | SE_67779 | chr1:19755047-19757873 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 19755197 | 19755368 | chr1 | 19756629 | 19757043 | chr1 | 19756200 | 19757454 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I019422 | chr1 | 19749273 | 19757876 |
|
Enhancer Sequence | ATTCTGTTGG GATCACAGAA ATTAGATCTG GACTGACATC TCAATTTCAT CTGAGTCCTG 60 CTCCTTCATT TGACGATGCA TAATGAGGTC CAGCGCAAGT TTTGCCAGGT TGCACAGATA 120 GAGGCAAAAT CCGCACCTAA ACCTGGATCT TCTTCGTGTT TTGAGGCCTG GCTCTGCCCC 180 GAGCCCTTCT CCCCCGTGAG TCTTTCATCC AGGGACTGTG TAAGTGACTG GCAGACACAA 240 CCGAACAGTG AGATGAGATT CTCACCCTCA AGGAGCTGTG ACCTAAGGTA GAGGACAGCC 300 AGAAAAAAAA AGCAGGAAAG AACTACACCA TCCTCCTACA TTCAACGCCC AGCATCCCAG 360 CTACCCCATT ATTTTCGAGG ACTGGTCCTC CCAGTGATTT GTCCAGGTCA TCAAGGTATC 420 AACTTTTTAA AAAAATTCTA GAAGACAGCA ATCTCTCTAA AATGTATTAC CTGCTCTACA 480 TTTTTACACA ATGCAAATGA TCACAGGACA ATGCAATGAA CACAGCTAAA CCATTTCTCA 540 TTAGCCTAAG GACAGTGTAT GAGTAGCCAC TCTTGGAACA GCACCCTGTG TCTGCTTTTT 600 ACATTTATCT GCTTCTTCTG CCAGGCTGTC AGCTACACTT CCTCAACTAA TATGTTGCTT 660 CTAATCTGCT ATGAGGTTGA GAACCCAGAA AATTAGAAAT CTGCTCTCAT TTCAAACAAA 720 AAAAAAAAAG AAACTCTGAG AGAAGGAATA AATCAGGTTG ATAACTTGGG GTCCAGAGTC 780 ACAGCCCACA AATAGTTTGT AAGTACCTTG ACACTATATG AAGATTACTT CTTCCTTTTC 840 TTGAAGAAGT TCAAGACTCT AAAGGCAGAG ATACGATATA CTAATAATTC CTACTTTCCC 900 ATACAACCTG CATAAGCAAG TCACCACCTC ATCCCTTGGA ACCTCAGTCT TCTTTAAAAC 960 CTGGGTCCGA CGGTACTGTC TACCTCACGG GCCACTGGGA ATGAGGTACC ACGTCTGGGC 1020 CATAAGGGCA CCGCCCACAG AGCATCCTCC ATAAAGGGTA GGAACTCTCC CAGAGAGTAA 1080 AGCACATGGC TTATCTGCCA GGACTTTTAC ATAACATTTT TTAGGTGCTA GAGGGTCCTT 1140 TCTGCCTGGA TTTTTCCCTC ACTTGACACA GGTTTTCCAT TCAGGCTGCC AGGAGTCTCT 1200 AGAAAGGTAG GCGGAGTGTT ATGTCAGTTT CCAAGTCATT AAGCACCCAC AAAGGAGGGC 1260 AGGCTTGCAC AGCACTCACT CCACACAACC GCCCCTGCCC TGAGTACGAC GGAGCACATG 1320 GCTTCCCTAA AGCCACAAGG AGAAGAGAGG CAGGGACAGT GAGAGCTGAA GGAATTCCAC 1380 ATGTGTCCAT GGAAGATCAC CTTCCCTTTG TTTTCCTGCA CTCTAGTAAC TCCCTCATGC 1440 AGCTTGCTTT CTGAAGCCCT CTGCTCCATT TCCCCAGCCC AGGACAGCAT CAAGAAATAT 1500 TTCCACCATC TCATCTATTT GAACCTTCTC CCTATTTACT GGTGCTCCCA ACCCCATCTG 1560 AGGCCATCGA AACCAGACAA CTGTGGCAGC ACTAGCAGAG TCCCCAAACT ACCCTGACAC 1620 CCTCCCTGGC AAGGAAAATT TCCACGCGCC TCTCCCTGGC ATATTTATTC CAGAGGAAAA 1680 CTTAGCAACC TACACACTAC ACACAGGCTC TGTGTCAAAC TCTACAACAG CCATCAGTTG 1740 ATCTTTCCCT TACACATCCC TCCAGGAAGT GAAATATCCG AAATGAGTCA TACTCAGGAG 1800 TCGGAGCTAT ACTTCCACTG TAGTTTTTTT GGATAACCAA TTCACTGTTT ACACTCCAAA 1860 ACCTCTAATT GCTGAACACA GAACAGTTCC TTTGCAGAGA TCAAAGCTTA CCTGGTGAAC 1920 CTGGCGAAAT GACAAAAATT CTCCAAAAGG AGTTAGCCAT CCAGAGTGCC AGAGGAGGGT 1980 GGCTGTACAA GCACATTTTA ATTGGCAAAG CAGAGTCGCT GCCCAGCAAG GAAGAGTATG 2040 CAGGGGTTTA TTCTGCTGCT CTTCTATTTC CCCTTTAAGG CATATATCTC TTACCCCTGC 2100 ACCCACCAAC TTTAGTCACT CCTAGCACAC AGCTGGCGGC CGCCCACCCG CACCCGCACC 2160 TGCACCCGCA CCTCAGAGAG CTTGCTGATC CCTGAGCCGT GCACTGAAGC TTCCAAGCAG 2220 CTCTACCTAA AGGCAAGCAC TGCCTGCTTT TTACAACATA TACAATGGGC TAACCTGATG 2280 CACAGAAAAA CCCTGGGTCA CATGACAACC AACAAACTCA TTGCTCAGGA TGGCTCTCCG 2340 CCACGTTTCT CAGGCACTGT GCTTGGCTCT GCTGGCCAAC TGAGTGAGCT GGAGCATTTT 2400 CTCTTGGGTG TGCATACCCC TCCACCTGTC CAACTTTAAA ACACAGAATC AACAGGGATG 2460 TTACACTAAA GGGGACCCTA GAAACCATAT AAACGGTGGA AAATTGAGGC CTGGACTGAC 2520 CCATAACAAA TGAGACATCA CATAATGGCA AATGAACCAT GACCAGAAAA CAAATCTCTT 2580 TAGTACACAG TTTAGCGCTT CTGCTTATAC AGGTTGAACA GCCCTAACCC AAAAATCCAA 2640 ATCCCAAACT TTTTGAGCGA AGACATGAGG CTCCAACGAG CATATCAGAC TTTCGGATTA 2700 GGAATGGTCA ACCAGTAAGT TCTGCAAATA TTCAAAATCT GAAAAGAATC CAAAGAAGTC 2760 TCAAATCCAA AATGCTTCTG GTCCCAAGCA TTTCGGATAA GAAACCTGTA GTTTAATCAT 2820 CAGTCAAAAT TTAAGAATAG AGTTGATTTT GGGCCGGGCA 2860
|