Tag | Content |
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EnhancerAtlas ID | HS178-00956 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:43389620-43390540 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF5 | MA0599.1 | chr1:43390442-43390452 | GGGGCGGGGC | - | 6.02 | SP1 | MA0079.4 | chr1:43390079-43390094 | CTGGCCCCGCCCATC | + | 6.12 | SP4 | MA0685.1 | chr1:43390079-43390096 | CTGGCCCCGCCCATCCC | + | 6.09 |
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| Number of super-enhancer constituents: 44 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43388635-43391497 | Aorta | SE_02447 | chr1:43389450-43390841 | Astrocytes | SE_04284 | chr1:43388072-43391724 | Brain_Anterior_Caudate | SE_05390 | chr1:43388151-43391958 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43388025-43393974 | Brain_Hippocampus_Middle | SE_07319 | chr1:43388405-43391978 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43388143-43392030 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43388647-43391690 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43389360-43391291 | CD3 | SE_12535 | chr1:43390172-43390265 | CD34_adult | SE_12535 | chr1:43390292-43390563 | CD34_adult | SE_12760 | chr1:43390284-43390416 | CD34_fetal | SE_12760 | chr1:43390429-43390577 | CD34_fetal | SE_13825 | chr1:43389164-43391654 | CD34_Primary_RO01536 | SE_14471 | chr1:43388393-43391813 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43389279-43391506 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43388655-43391579 | CD56 | SE_20799 | chr1:43388221-43391924 | CD8_Memory_7pool | SE_22754 | chr1:43388539-43391966 | CD8_primiary | SE_23189 | chr1:43390022-43390921 | Colon_Crypt_1 | SE_23904 | chr1:43389578-43390870 | Colon_Crypt_2 | SE_25177 | chr1:43389684-43390966 | Colon_Crypt_3 | SE_26580 | chr1:43388388-43391637 | Esophagus | SE_29267 | chr1:43388900-43391396 | Fetal_Intestine_Large | SE_31882 | chr1:43389453-43391047 | Gastric | SE_34353 | chr1:43388462-43391906 | HCT-116 | SE_35049 | chr1:43389580-43391635 | HeLa | SE_37191 | chr1:43388684-43391074 | HSMMtube | SE_39883 | chr1:43388409-43391939 | K562 | SE_41620 | chr1:43389610-43390885 | LNCaP | SE_42796 | chr1:43389383-43391496 | Lung | SE_50202 | chr1:43388739-43391601 | Sigmoid_Colon | SE_54088 | chr1:43388672-43391178 | Spleen | SE_55340 | chr1:43389444-43391203 | Thymus | SE_55821 | chr1:43388031-43391835 | u87 | SE_57045 | chr1:43388803-43391033 | VACO_400 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43389426-43390586 | HSMM | SE_64340 | chr1:43389562-43390582 | NHEK | SE_67781 | chr1:43388031-43391835 | u87 | SE_68708 | chr1:43389555-43391604 | H9 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I042923 | chr1 | 43388473 | 43392374 |
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Enhancer Sequence | AATTCCGGTA CAGCGTGGAG AGCGCTTTGA TGGAGGAAAT ACAAGCCGAT GTAGTGTTCC 60 CGGGAAAACC TGATCCAGAA GGCTTCCAGG GAGAGGAGAT TTTGCGCCTA AGATTTCAAA 120 TGAAAGATCT CATAACACTG TCAGTGAAAC AACTAAGCAC TGCTGGGAAA AGATGGTGGC 180 CTGGAGAACA GTCCCGTTAT CTATTTACCC CTTTTCGTCA GAAACCGTAG ACGTCACCTT 240 ACGCGGGATA GGAACCCGGG TGAGCTACGT CCCCAGGGAT GCCCAGCGAT ACACAAGTCA 300 CCGTCACCCC CTCCAGAGTA AACCGCATCG CCTGGCAAGC AGGCGCCCAG GTCGTCCCCA 360 AGGGCCAGCG CCTGGAACCG CCAGGGTGTG ATTGGTGGAG TCTTGGAGCC CGCCCCTCGT 420 CGGGCCCAAC AATGCGCCTC TGATTGGTGG AGAAACCACC TGGCCCCGCC CATCCCCAAT 480 CGTGTCCGTG CGCCGCCGGT GGCCCGGCTT AGGGGACCGC TGTGAGGTCT GGAGAGGATG 540 CGCCATCGAC CCCGGCAGTA GGCGGCCGAA CCTTGGCCCC AAATCTTCTA CCCCGGGGTG 600 GATTGCGGCC CCTAGAGGAA AGGCGTCAGG GGACCGACCG GCAGCTGTGC CGTCGCGGCA 660 CTCTGGACCA CGCTGAGGGC GGGCCGGCTT CCCTGCGCCT GCGCTGACAT TTTGCAGTTT 720 GGGAAATGGC GGTGCTCGGG GACGTCGATA CTGACCCAGG GCGGGAGGCA GCTGCGAGTG 780 GATTGTCGGG CCTTTTCAGA CCGGGGTCTG AACCTCTGGG CCGGGGCGGG GCTCGGGTGC 840 TGCCTGGCTC TGCCAACGTT CTGGGCCCTC GAGTGTGAAT GAGCTCCGCC CGCCATCCGC 900 CTTGTAGTCC TCGCGTCCGG 920
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