Tag | Content |
---|
EnhancerAtlas ID | HS178-00870 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:38484250-38484730 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr1:38484315-38484330 | AGTTATTCATTAATT | - | 6.29 | HOXA13 | MA0650.2 | chr1:38484273-38484284 | GTTTTATTGGT | - | 6.32 | NFYA | MA0060.3 | chr1:38484265-38484276 | TCTGATTGGTT | - | 6.62 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_48112 | chr1:38484176-38484674 | Psoas_Muscle | SE_48112 | chr1:38484680-38485158 | Psoas_Muscle | SE_51103 | chr1:38471257-38485159 | Skeletal_Muscle | SE_68005 | chr1:38454886-38539808 | TC32 | SE_68006 | chr1:38454886-38539808 | TC32 | SE_68007 | chr1:38454886-38539808 | TC32 | SE_68008 | chr1:38454886-38539808 | TC32 | SE_68413 | chr1:38454915-38537208 | TC71 | SE_68414 | chr1:38454915-38537208 | TC71 | SE_68415 | chr1:38454915-38537208 | TC71 | SE_68416 | chr1:38454915-38537208 | TC71 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I038018 | chr1 | 38484177 | 38484674 | GH01I038020 | chr1 | 38484721 | 38484870 |
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Enhancer Sequence | TAATTCACTC TTTGTTCTGA TTGGTTTTAT TGGTTAAGAA GGGAAACTTA AATTCATCAA 60 TCTCAAGTTA TTCATTAATT TCTTCTGGCA TTTACAATCT CACTTGATTG TAATAATGAT 120 TTAGAAGTAT AGTTAGCATG GTAGAGTGGA AAGAGTTCAG GTTTGGGAAT GAGACAGACC 180 TAGGGTTTGA GTTCTGGCAC TGCCATAAAT TACTAGCCCC ATGACAATGG GCAAATTCAA 240 CTCCCTGAGG CTCTTCCCTC ATTTCTGTCT CAGGCGACTG TTGCAGGGAT TAAGTGCGTC 300 TTGGGAAGTG CCTAGCCCAA TACCTGATAT TTGTTGGGAT CCTTTCCTTT AAAAGAATAA 360 AGCAAGTTCT TTGCTGGCTG GCAATAATGA TGTGAAATGG TTTAAACTTT TGCAGTTTTT 420 TTTTTTTTTT GGTACCCTAG AAGAATCTAA TATAAAGTGA GACCATATTC TGTGTTCTAG 480
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