Tag | Content |
---|
EnhancerAtlas ID | HS178-00754 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:32014150-32016260 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:32014650-32014669 | TACTGCCACCTACTGGCCA | - | 8.52 | Gata4 | MA0482.1 | chr1:32014747-32014758 | TCTTATCTCTT | + | 6.02 | KLF16 | MA0741.1 | chr1:32014281-32014292 | GGGGGCGTGGC | - | 6.62 | Myod1 | MA0499.1 | chr1:32015598-32015611 | TGCAGCTGTCACC | + | 6.5 | Nr2f6 | MA0677.1 | chr1:32015525-32015539 | AGTGTCAAAGGTCA | + | 6.74 | Rxra | MA0512.2 | chr1:32015525-32015539 | AGTGTCAAAGGTCA | + | 6.27 | SP1 | MA0079.4 | chr1:32014280-32014295 | GGGGGGCGTGGCTTG | - | 7.85 | SP3 | MA0746.2 | chr1:32014280-32014293 | GGGGGGCGTGGCT | - | 6.74 | SP4 | MA0685.1 | chr1:32014278-32014295 | GCGGGGGGCGTGGCTTG | - | 6.93 | SP8 | MA0747.1 | chr1:32014280-32014292 | GGGGGGCGTGGC | - | 6.44 |
|
| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_23348 | chr1:32013983-32015757 | Colon_Crypt_1 | SE_23348 | chr1:32015765-32016194 | Colon_Crypt_1 | SE_28118 | chr1:32013906-32016515 | Fetal_Intestine | SE_52749 | chr1:32014053-32016265 | Small_Intestine | SE_57549 | chr1:32014832-32015308 | VACO_503 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I031548 | chr1 | 32013882 | 32016385 |
|
Enhancer Sequence | CCATTCCAGG TTTGTGGGGT CACCTTGGAG TGAGGCCAGT CATCTGATGT ACCTTGTCCT 60 CAGCCACATG CAGCTGCGTG GGTGCAGCAG CAGAATGGGT GGAGGGCTTT GGGGAAGAGC 120 CAACGTGGGC GGGGGGCGTG GCTTGGAGTA TGAGGTGGCC GTGGGCTCCC TGCAGGCCCA 180 GGCTCCATTT ACGGCCAGCT GCCTGCTGTC CTCGCCCTGC TCCGGCATGC TGTCTTTCCA 240 CATCCGTTAC CCACTGCGCG CTCATAATGC TCCCACTTTA CAGAGGCCAT TTACTCTGGC 300 CACCTAGTAG TTGGTGGCAG AGTTGGGATT TGAATCCAAA TGGAGGTTCA TTGTTCTCCA 360 TTCAGGGTAG CAGGGGCACG CGTGCTGTGT TTAAGAGAGA CTTGCATGCC TCGTGGTGGA 420 AATAAACTTT GGTGGATTAA ACTTTAGGTA TTTTGCGCCC TGGTTGGGCC AGGCTTTGTC 480 CCAGTTCGAC CACAGTGACT TACTGCCACC TACTGGCCAT TCTCAGTGTT GCACCCACGT 540 AGGATTTGCT CACGGTCTGG GTCTAACCAT GCCTGGTTCA AAGGGGAGGA CCGGAGCTCT 600 TATCTCTTTG ACAAATCAGA CAAACCAGGA AACAGAGGTC CAGAGAGGTG ACTTTAAGCT 660 TTCATCTGCA CTTGCCTACC CCATCTATTC AGTTGTTCAT TCGTTCAATA AATATTTCTT 720 GGAAACCTAC TATGTGCTAG GTGCTGGGGC TCTGCAGGGA ATGAGACAGC AGAGAGCGCT 780 GCTCCGTATA GCTGACATGC CCTGTAGGGG AGCGGGAGGG AGGGACACAC CATCAACAAG 840 TAAATCAGTG AGAGGATGAA AGATGGCGAT GGGTGCCGGG AAGGAACAAG GAGACAGCGA 900 CTGGAGAGGG TGGTCAGGAG TTGCCAGTGG AGGGAAGACC TGAAGGGTGA GAGGGACGGG 960 GAAAGACACC CTAGGAAGAG GGAGCAGCGT CACAAAGGCC CTGAGAGGCT GAAAGGTTTG 1020 GGCGGGTTCC AGGAACACAG GCGGCCAGGG AGGTGGAGCC CACACCTCAA CACACAACTA 1080 CCCGTGAAGA ACGTGGAGCG ATCCGTGTAG ATCCTTGTAG AAGGTTCTCT CAGAGGGCCA 1140 TGTCACTGAC CTGTCAGTCA GCCCACAGCC TCCTCCCAGT CCCCAGATAG CTGACCACTC 1200 CCTCCTTGAA ATTCTCTCCT CTCTCAGCTT GTGCAACACC AACCTCCGGT GGCAGGAAAA 1260 ACTATTATTA TTCTCTTGTG AAAATTAAAA CTTAACCATC AACATAGAGC TGTTACTGGT 1320 TTGAAGGAAG CCATTGACGC TGTGTCAAAG GCTAGAGCAG AAAACAGTGG CATGCAGTGT 1380 CAAAGGTCAA AGTCAACACT TCTCGGACTG GCACAGGGAA GGTAGGTCAG GACAGAGTCA 1440 GTCTTGCTTG CAGCTGTCAC CATGTTATAA GCGTGTTGAT GGCCCTGTCT GCTGCTAGTG 1500 GTGAGTCATT CTTGCAAATA AAGTGACTAT TTATAAGTTT ATAGATATGA GTATGCTTTG 1560 TTCAAATCCT ACGAGTAGTG TTCAAGAAAT AAGGTGTGGG AGTAAAATAA GTCTGTGATC 1620 CAGTAAGTCC ATTGGCAATT CCCATATGTT ACTCAAATGC TATCCAATTA GCTGGTATTT 1680 TCCAGTGTGT GAATATTTGC TATAGGCTAT GGTTCTTTGT AATGCAAAAT ATTTTCATCC 1740 TTAAAAAGGA GAAAGTTAAG CCTGGACAAC ATAGTGAGAC CCCATTTGTA CAAAAAATAA 1800 GAAAAAATTA GCCCAGCATA GTCACGCATG CCTGCTCTCA GCTACGCAGG AGGCTGAGGC 1860 AGGAACATCG TGATCCTGAG AGTTCAGAGG TTGGGGGGAG CCATGATTGC TCCACTGCAC 1920 TCCAGCCTGG GTAACAGAGC ATGACCCTGT CTCAAAAAAA AAAAAAAAAA AAAAAAAAGA 1980 GAGAGAAAGT TATATGAAGC AACATGTACC CTCATACCCA ACCTGAAGAT GTGATTAGAC 2040 ACAATCTTAT GAATTCAACT AACATCAATG CAAAATGAAA TAAAATTTCC TATGTTTGAA 2100 TTATTTGTCA 2110
|