EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS178-00562

Organism

Homo sapiens

Tissue/cell

Skeletal_muscle

Coordinate

chr1:24406680-24407810

Target genes

Number: 19
Name	Ensembl ID

ID3	ENSG00000117318
RPL11	ENSG00000142676
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
RP5	ENSG00000236810
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
CNR2	ENSG00000188822
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529
MYOM3	ENSG00000142661
IL22RA1	ENSG00000142677
IL28RA	ENSG00000185436
GRHL3	ENSG00000158055
NIPAL3	ENSG00000001461

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1

MA0149.1

chr1:24407770-24407788

GGAAGGAGGGAAGGGCAG

6.19

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_40929	chr1:24405919-24409520	Left_Ventricle
SE_49006	chr1:24406026-24408004	Right_Atrium
SE_51642	chr1:24406330-24408748	Skeletal_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I024079

chr1

24405920

24409520

Enhancer Sequence

GGGCCTGTGA CAAGTGAGAG ATGGGAAGAG ATGTGTGAGT TGGGCAGCCA GGCAGCCAGC 60
CAGGTAAGCA GCAAGCCCAG CAGTCAGTCA ACAAGCTTGT CAATCCCTCA GTCACAGTCA 120
AGCCAGGAAG GGCCTGTTCT GGGTGTCGCC AAGCCCGGGC CAACCTTGGC TTCATGACAA 180
AGCCTGGCTC TGGGCCTGAA ACCACGGTTA ACTTTTCAAA ATGCGCTCAG CCTCCCCTCC 240
TCCCGGTAGC TTCCCTGACC TTCCCCATCC CCATCCCAGA CAGCATTAAT CCTTCTAAAG 300
TGCTTCAGTG TTTAGTGACT CTAGTGTAAC TTCTAGAGTC AGACCTCTGG GGTTCATGTC 360
AAAACTCCAC CTCTTCCAGA TATGGGGACT CTGGATGAGA TACTTAGCCT CTTTGTTCCT 420
GTCCCCTCGT CTGTAAAATG GGGATAATAA TAGCTCTTAT AATATAGTGC TTTTGTGAGC 480
ATTAGTGAGA TAATTTATGA AAAGTGTTTG GTACCTAGTA ACGGCCCAAT AAATACTCGT 540
TGTTTATAAT TGTGGTTGTC GAAAGCATCA TATGTTTTAG TTATCTGCCA CTGAGGTAGA 600
GGTTTTGTGT AGAAAACAGA ACTGAGCTGA ACAAAATGAT GGAAGGGTGT GATTCTCCTT 660
CCTCAGTGGG AGGTGAGGGG CTCATTTGTG AGAAGACTTA CTGGGTTATG GGAGCAGTGG 720
GTAGGGTGGC CAACTGTCCA TTTGTCCAAG ACTAAGAGGG TTCCTGGGAC TTGGGATTTT 780
CAGTAGGAAA CTGAAAGTCT CAGGCAAACC AGGACTAGTT ACTCACCCTA GCAGTGCACC 840
TTTGGGGCTG GAGATTGGTC TATGGCTAGA AGCAGGCAGG CTCTCGAGTT GGGAAATAGT 900
TTGTGCTGGG GATACAGGGC CAGTTGATGG CCCAGGTCAG GGGTCCTTTA AGACAGGCTT 960
AGGACTCCAT TTGTGTCAGG AATTATAGAG TGGGTTTGTG CAAGGGCCAG GGGCCTGGGG 1020
TGCAGGACAA ACAGTGCAAG CCTGAATGCA TAGAGGAGAG CGGCAACCTT CATCTCATTG 1080
GGTAGGTTTG GGAAGGAGGG AAGGGCAGGC ACTGGACTTC AGGCCTGCAG 1130