EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS178-00560

Organism

Homo sapiens

Tissue/cell

Skeletal_muscle

Coordinate

chr1:24398500-24399020

Target genes

Number: 17
Name	Ensembl ID

RPL11	ENSG00000142676
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
CNR2	ENSG00000188822
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529
MYOM3	ENSG00000142661
IL22RA1	ENSG00000142677
IL28RA	ENSG00000185436
GRHL3	ENSG00000158055
NIPAL3	ENSG00000001461

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2C	MA0524.2	chr1:24398678-24398690	TGCCCTGGGGCA	+	6.44
TFAP2C	MA0524.2	chr1:24398678-24398690	TGCCCTGGGGCA	-	7.22

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_40929

chr1:24397239-24399162

Left_Ventricle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I024070

chr1

24397237

24398987

Enhancer Sequence

GCTCTGGGAT AGGGGGAAGT GAGGAAGAAA CCAGAGAGAA TGAAATATCC TGGTCGGGGG 60
TGGGGGGCCC ACAGGAGCCG TCCTAGGATC CTGTGCTGGG TCAAAATTCC AAGAGACACC 120
TCCCCCGACC TTGGGGTTCC TTGGCTCCAT AGGGGCCATG ATGAGTACTG TGAGCCTTTG 180
CCCTGGGGCA CTGAGGGTGA TGCCGGGGCT GCTGCTGGCC ACCCTGAGAT TGCGTCCTCT 240
CCCCGTCCTT CAAGGCCTAG ATCAAGTCTC GCCTCCCTAG AGGAGCACCT ACCATGTGCC 300
TGGTTCTGCA TATACTTCAT TAGTCCTCTG CAGTGCTGTG GGCTGAGCAT TACTGTCTAC 360
CTCTGGTCAC TCTAGGACCA CTGGTGCCAG GGCCTTATTG CTCACCCCTG TCACATGCTA 420
TCTTAGTGTC CCTGGGTCTG GACGACACAC CGAGCACTGC AGCCCAGAAG TCTCAGACTG 480
TTCTAGAATG CTGTCTCATT TGCTGACCGT TTCTTCTTCT 520