Tag | Content |
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EnhancerAtlas ID | HS178-00430 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:19716200-19718990 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:19717998-19718017 | CGTCCAGCAGAGGGCTCTG | + | 6 | NEUROD2 | MA0668.1 | chr1:19717661-19717671 | GCCATATGGT | + | 6.02 | TEAD1 | MA0090.2 | chr1:19717870-19717880 | CACATTCCAT | + | 6.02 | TFAP4 | MA0691.1 | chr1:19717593-19717603 | AACAGCTGAT | + | 6.02 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_01631 | chr1:19716172-19718011 | Aorta | SE_01631 | chr1:19718069-19719052 | Aorta | SE_04046 | chr1:19716514-19718685 | Brain_Anterior_Caudate | SE_05077 | chr1:19716739-19718770 | Brain_Cingulate_Gyrus | SE_05833 | chr1:19716201-19720492 | Brain_Hippocampus_Middle | SE_18410 | chr1:19716176-19720317 | CD4p_CD25-_Il17-_PMAstim_Th | SE_25786 | chr1:19716549-19718828 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19716179-19720568 | Esophagus | SE_28013 | chr1:19716841-19718501 | Fetal_Intestine | SE_28668 | chr1:19716604-19718754 | Fetal_Intestine_Large | SE_31164 | chr1:19716409-19719128 | Fetal_Thymus | SE_31447 | chr1:19716397-19718506 | Gastric | SE_42185 | chr1:19716243-19719159 | Lung | SE_45720 | chr1:19716651-19718686 | Osteoblasts | SE_46635 | chr1:19716568-19717616 | Ovary | SE_46635 | chr1:19718098-19718452 | Ovary | SE_48688 | chr1:19716506-19718426 | Right_Atrium | SE_50058 | chr1:19716289-19720556 | Sigmoid_Colon | SE_51211 | chr1:19716277-19718925 | Skeletal_Muscle | SE_52345 | chr1:19716229-19719127 | Small_Intestine | SE_54550 | chr1:19716169-19718904 | Stomach_Smooth_Muscle | SE_65446 | chr1:19716642-19717397 | Pancreatic_islets | SE_65446 | chr1:19717662-19720701 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 19717195 | 19718433 | chr1 | 19716796 | 19717030 | chr1 | 19717212 | 19718898 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I019389 | chr1 | 19716333 | 19720569 |
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Enhancer Sequence | TGAGCCACTG CGCCTGGCCA GGCCATGTAT TTTTATTTGC TAAATCTGAC AGCCAATCCC 60 CACTGCTCTC TTAAATCTTA CTGATCCTTC AGGGCCTGGC CCAAACTCCA ACTTCTTTAT 120 CAAGATGTCA AATTCTTCAG AATTCCTGCA GTAACACTAA TATCAACTGA ATCCTAAATG 180 CTTTGGGGAT GGCTGTTCTA ATACTGCCAA TGACTTTCAC CTTACTCCTT CCTCACCACT 240 TAGCATTTTT CATTGTGAAT TGACTCCACA CCTACAGAGG CCAAGACAGG CCCTCCAGCC 300 TCAGCGCAGC ATCACGCCCG CTGCAGCAGG GATCAGTCAA TGCATGCTGA TTCCATGTAA 360 GTGGATATTA ATCCTGTGGT CTGAGGCCAT ATTACAGAAC CAGAATGAAG GCAGTGTATC 420 TCTGTAATCT AACCAGTCCC TACACTCATC TGAACCCCGG CCCCCGCCCC CTACTCATGT 480 CGAGTGCTTA GAGCAGTGGA AGAAATCACA TTAAGTGTCA CAGACCATGG GTTTGTACAG 540 TGATTTAAAT GAAACGACAG GTCCAAACAA AGCCGAGAGT TCACTTTGGG GTGCATGTGG 600 CACTGGCTCT GTCGCCTCCA AAGCCAGGGA GGGCCTCTGA GGAGGAGGAG CGGTGCTGAC 660 ACGCGGCAGC CGGATGGTTT CTGTCTAAAC CACCCATCTG AACTGCCTAA CGGCCTTGGA 720 GGGAAGGTTC AGATAACACC AAAGGTGTCA GACCAATCCA GGCTGTTGGG GGGATTTAAA 780 CATAATTCCC AGTGACTTGG AATAATAAAC ACTACACTGG TCAGGACAGT GCCTGCCGTC 840 TTTCTGGTGG GAGTTCAGGG CTCCACCAGT TCCTCTGCTG CCACAGGAGT GTGCCCACCC 900 CAGGGAGCAG GAGCCACAAG TCCTTCACCA CCGATACTTT TGCCGGGCTC GGTGGTACCC 960 AGGAGGCCAC TGGAAAGACG GGTGGGGAGT GGGTAAAGTG AACTAGGGCA GGGAAAAGAA 1020 AAAACCCCAG AAGGTAGAAG GTAAGGGAGA GACTAGGATG CCATTGGCAA CGGCCTCAGG 1080 TGACACCTGA ATAATAATCC GTGGAAGGAC CAGGTGATCG TAATAGCCCT GCCCTGCGTG 1140 GCAGGCACTA TGCTAGCAGC TCTCCCTGCC CTTCCCTATG ATCCTGACAA TGGCTCTTCA 1200 CACAGACACG CACTCCAGTC CTTGTTTTAA AGAAGGGGAA ACAGGGCCTT AGAGAAATAA 1260 CTTGACCGGA GCCACGCAGC TACGGGCCAA TGTCTGAGGA AGGACATGCA GTTATATACA 1320 GCACAGCTAG GTTCAAAAAG AAACTGCTTT TCCCAAACTG AACACTTTTT TTTTTTCTTA 1380 AATCATCCAA CCCAACAGCT GATCACACGA AGAGATACAA ATCAGAAGTT TCCGGCCACA 1440 AGTGAGGTTC GTGTTTGTGC CGCCATATGG TTCTACTTTG CCTCTTCCTC TTCTCCATTA 1500 GTTATTAATG TTGAAAAAAA TTGTTCAACC AGAAAAAGAA ACTTGAGATG AACCCTTAAA 1560 AAAAGCACAA AAGCCAGAGC AGCTCAGACC CACGGAGTCT AACCCACGGC GCCCTTGTCT 1620 TTAAGAAGTG CACCCTTGTA CCTCGGTTTT TTAAAAAATG GCCAAATGAA CACATTCCAT 1680 CTTTTGATCT GCCTGTTGGC CGAGAGCCCA CCACCAGCAA GATAGGAATC AAAAACAGAT 1740 TCTGCGTACT TGGGTGCACT CAGAGGAAAC TGCCACGCCA GAATGCTGCA GCTGCCGACG 1800 TCCAGCAGAG GGCTCTGTGA CAATTTGTTC CTTTTATTTT TCCAGAAGGC CCAAAACTTT 1860 CTTAAAAAGA TAAAAGAGCA TTTCAAGTGG CACATACACT CGTGTCAGAA ACAAAATATA 1920 CAGTGTGGCA TTCTGTAAAA ACACCAACCT CGAAACCGAA CAGGTTCAAA TCCTCGGTCA 1980 GTCACTTGCT GGCTGAGTGT AACCTTCCTA AGTCTCTGGA ACTGGGGGTT ACAACATCCA 2040 TGTCAAGGAG AAATTCACAC TGTTCCATAA ACCCCGAATG CCCGCTCCAG GCCCGTGTCA 2100 GGTGCAAGGG CTCAGCACGG GAAGAGATGG ACATGGGCGG CCCTGCTCTG ACAGCAAAGT 2160 CCAGCCACAG AGGCATCTCC AAGAGGCAAG GGTAGGCCAG GCATGGTGGC TCACGCCTGT 2220 AACCAGCACT TTGGGAGGCT GAGGAGGGTG GATCACTTGA GTTCAGGAGT TCAAGACCAG 2280 CCTGGCCAAT GTGGCAAAAC CCCATCTCTA CTAAAAATAT ACAAAAATTA GCCAGGTGTG 2340 GTGGTGCATG CCTATAATCC CAGCTACTCA GGAGGCCGAA GCAGGAGAAT CACTTGAATC 2400 TGGGAGATAG AGGTTGCCGT GAGCCAAGAC TGTGTCACTG CACTGTAGCC TGTGCGACAC 2460 AGAGAGACTC TGTCTCAAGG TAAAAAAAAA AAAAAAAAAA GAGGCAGGAA GCGAACCTGC 2520 AGGAGACGAC AGAAGGGGGT TGCTGTGGGG GCAAGTCAGC AGTCTAGGAG GTGGCACAGA 2580 GATGACATGT GAATAATGAC CAAGGAGCCG GCCCTCCAAG ACTGCAGGGA AAAATAACAG 2640 GGGCATCCCA AGAAGAGGGA AGAGCTGGCA TGAGGCTCTG CTGCAGAGGC CACTGAGGCA 2700 AGTGCAAGAA CAGAGAGGAG CAAAGCGCGG CTGGAGTGAG ACCCAGTGAG GCAGCACGCA 2760 GCACCTCCTG GGTCACTCCA AGTGTGAGGG 2790
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