Tag | Content |
---|
EnhancerAtlas ID | HS178-00287 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:12492530-12494800 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr1:12494625-12494641 | GTTTGTTTATTTAGCC | - | 6.18 | RARA(var.2) | MA0730.1 | chr1:12493624-12493641 | GGGTCATTCCAAGTTCA | + | 6.12 | RUNX1 | MA0002.2 | chr1:12494493-12494504 | CTCTGTGGTTT | + | 6.14 | ZNF263 | MA0528.1 | chr1:12494025-12494046 | GGAGGAGGAGGAGGAGGAAAG | + | 10.19 | ZNF263 | MA0528.1 | chr1:12493951-12493972 | AGAGGAGGAGGTAGGGGGTGG | + | 6.36 | ZNF263 | MA0528.1 | chr1:12493954-12493975 | GGAGGAGGTAGGGGGTGGGGA | + | 7.37 | ZNF263 | MA0528.1 | chr1:12494028-12494049 | GGAGGAGGAGGAGGAAAGAAG | + | 8.13 | ZNF263 | MA0528.1 | chr1:12494022-12494043 | TGTGGAGGAGGAGGAGGAGGA | + | 8.15 |
|
| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_00009 | chr1:12492605-12496972 | Adipose_Nuclei | SE_01743 | chr1:12492493-12494609 | Aorta | SE_03005 | chr1:12493307-12494046 | Bladder | SE_03005 | chr1:12494394-12494761 | Bladder | SE_15065 | chr1:12492619-12497585 | CD4_Memory_Primary_7pool | SE_20910 | chr1:12492967-12497444 | CD8_Memory_7pool | SE_26086 | chr1:12493139-12494968 | Duodenum_Smooth_Muscle | SE_26716 | chr1:12492824-12494882 | Esophagus | SE_29231 | chr1:12492824-12495344 | Fetal_Intestine_Large | SE_29871 | chr1:12492943-12496653 | Fetal_Muscle | SE_33776 | chr1:12492745-12496835 | HCC1954 | SE_37319 | chr1:12492732-12495649 | HSMMtube | SE_39882 | chr1:12492813-12499393 | K562 | SE_41209 | chr1:12492560-12495038 | Left_Ventricle | SE_42647 | chr1:12492609-12494807 | Lung | SE_45864 | chr1:12493103-12496844 | Osteoblasts | SE_49026 | chr1:12492458-12494788 | Right_Atrium | SE_50544 | chr1:12492877-12494722 | Sigmoid_Colon | SE_51539 | chr1:12492828-12494951 | Skeletal_Muscle | SE_52815 | chr1:12492745-12494814 | Small_Intestine | SE_54847 | chr1:12492782-12495035 | Stomach_Smooth_Muscle |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I012432 | chr1 | 12492844 | 12500570 |
|
Enhancer Sequence | CTCTCAGTGG ACACTGAAAA TGTGGATGTG TCCAGTTGCC TGCTGTCCAG CAACCCTGGA 60 AGAACTTGTG ATGGCTTTGT CTTCGTTATG AGAACACTTT GATCTGAACC CCTTTCCTTT 120 TCTGAATCCT TTCCCTTTTT TTTTTTTTTT TAAGACAGTC TCACTGGCTG AAGTGCAATG 180 GCACCATCTT GTCTCACTGC AACCTCTGCT TCTTGGGTTC AGGCAATCCT CCCAACCCGG 240 CCTCCTGAGT AGCTGGGACT ACGGGAGCAC ACCACCACAC CTGGCTAAAT TTTTTTTTCT 300 CGTAGAGATG GGGTTTCTCT ATGTTGCTCA GGCTGGTCTC TAACTCCTGG GCTGAAGTGA 360 TCCTCCTGCC TCAGCCTCCC AAAGTGCTGG GATTACAGGC ATGAGCCACT GTGCCTGGCG 420 TCTGAGTCCT CCTTCTAAAG GGAACCCACT GCACAGCATC TGGCTGCTGC CAACAAAATG 480 ACTGCCCCAC CAGTCCCACA GGTGATGAGA GTTTGCAATG GCCTTCACAG CTTAGTACCT 540 TAGTACCTTT TCTCTCCTGG TAACTTAGAA TGGAAGCCCC ATGGGGGCCC ACGCATATCT 600 GCGAGGGTGC ACAGGCATGT GGCAGAATGA GCCAGGGGCC ACCCTCTTGT TCTGGAGGTG 660 CTGAGAGCCG GCCTGGCTGG GGGCTGTAAC TGTCAGGCTG ACTCCCAGCC ACACTGTCCT 720 CCCTGGAGTA GGTGCTCGAA ACCTTTGCTT TTTGCCTTTT CGCTTTAATC TGGAACGCTT 780 GGGGAAAAAA AAAAAACAAA AAAACAAAAA AACAACAACA AAACAGTAGA CCAAATGGTG 840 ACTGAGTCCC AACCCTTCTT CAGGCCAGAT GAAATCATGG TCCCTGCTGG CGCCATTCCT 900 CCATCTCAGA GCCCTCACTT GGGTTCAGAC CCTCAGTCAC ACAGGGAGCC CCGCCACAGC 960 TGAAGTGTTT TGTCAGAGCA AGATTGCAAA GAGTTAACAC TTTTGCTTTT TCGGAAAGTT 1020 ATCTGTGAAG AGTATTAGTT GTTTAATAAA GCGTGCCTGC CCTCCCGATG AACCCGCCAG 1080 TGACTCTGCA GCTGGGGTCA TTCCAAGTTC ACGCAGTGGA CTTTTGACTG CCTTCTGTGT 1140 CTGTGAAAAC AGTCGGCAGC TCCTGCGGGG ATCATTCATT CAGGCCTGTA ACACAAAACT 1200 ATTGCCAATG GGCACCTGCT GGGGCAGCTT CCCGGGAGGG CTGGGAGGAA GATACCAAAC 1260 TCATCAGGCA TCTGTGGAGA TAAGAGCGGC AGGGGATCCA CTGGGATCCC GCTAATCAGG 1320 CCTGCACTTA GACCCCACTG CCTGGCCAAC AGGCTGGTGT CAGAATGTAT TAGGCAGCCC 1380 TGGCCAGGAT AGGATGTGAG CTAATTAAAG GCCTTTTACA AAGAGGAGGA GGTAGGGGGT 1440 GGGGAGAGAG AGAGAGTGAG AGAGAGAGAG AGAGAGTGTG TGTGTGTGTG TGTGTGGAGG 1500 AGGAGGAGGA GGAAAGAAGT TTGAAGTGCA TTCCCCAAAT TTCCAGCACA TTCTTTATTC 1560 CTCTGTTTTA TCCCTCAAAA CAGAAGAAAA CAAATTAGAG GCTGAGCATT TGGTTATTTC 1620 TAACCTGAAA TTGTCATTCA TTGTGCCTGA TGCCGTATTG GTTTTAACTG CTATTTTTGT 1680 GGAATTACAT ATACTGTGAA AGACATCTTT TGCCGCAGTC TCCCTGGGAA CATCCTGTTG 1740 TTGAAATGCC GTTGGTCAGC TGCTTGAATT TTGCCCTTTT CTCTGACTTT GACACATCAA 1800 GGCAAAAATA GGTACCTATT TGTGGTGTGT TCTAGGTTTC TCCCTTTTGC TTGGAAAATC 1860 CACTTGCCAG CTGTGAAGGG TGCTGCTGGG AGGATGAAAT GAGTCAGTGC ACAGCGTGTG 1920 CTCTTAAAGT TTGGTGGTTG AGGTGGCGGT GGTAGCAGCT TGGCTCTGTG GTTTAAAATG 1980 CCACAGCATG CACTATCTTG AAAATACTCA GTAGTCCTAG CATACAACTG GGTTTTAGTT 2040 ACACCTACTT AAGGAAGAAA GCTCATTTGA AAGTGTTTGA TTTTCCTGTA CTTTCGTTTG 2100 TTTATTTAGC CTGTGTATTC CCCCCACCCC CAGTAAGCAG CAAACTAACT TATTTATAGG 2160 CCTCAGGTAT GTTTAAATCT GTGGTATTTT CTTAATCAGC CTGATAATGA TACATTTTTG 2220 AAAGCAGTTT TGTTCACACA TAAACCTAAG CCTTTATTAT ATTATTCTGA 2270
|