Tag | Content |
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EnhancerAtlas ID | HS178-00135 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:8498150-8500440 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ELF3 | MA0640.1 | chr1:8498713-8498726 | TTACTTCCGGCTA | - | 6.54 | ONECUT1 | MA0679.1 | chr1:8498368-8498382 | AAAAAATCAATATA | + | 6.62 | ONECUT2 | MA0756.1 | chr1:8498368-8498382 | AAAAAATCAATATA | + | 6.91 | ONECUT3 | MA0757.1 | chr1:8498368-8498382 | AAAAAATCAATATA | + | 7.19 | Sox6 | MA0515.1 | chr1:8499620-8499630 | CCATTGTTTT | + | 6.02 |
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| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_00045 | chr1:8497982-8499894 | Adipose_Nuclei | SE_02022 | chr1:8498913-8499948 | Aorta | SE_03947 | chr1:8498778-8499975 | Brain_Anterior_Caudate | SE_04978 | chr1:8498182-8500162 | Brain_Cingulate_Gyrus | SE_07042 | chr1:8498385-8500215 | Brain_Hippocampus_Middle_150 | SE_07921 | chr1:8498882-8500242 | Brain_Inferior_Temporal_Lobe | SE_11329 | chr1:8496575-8500743 | CD20 | SE_25808 | chr1:8497845-8499987 | Duodenum_Smooth_Muscle | SE_28078 | chr1:8498322-8500011 | Fetal_Intestine | SE_29095 | chr1:8498172-8499988 | Fetal_Intestine_Large | SE_29887 | chr1:8497659-8500219 | Fetal_Muscle | SE_31622 | chr1:8498048-8498478 | Gastric | SE_31622 | chr1:8498521-8499967 | Gastric | SE_40658 | chr1:8498953-8499664 | Left_Ventricle | SE_41679 | chr1:8499010-8499949 | LNCaP | SE_41679 | chr1:8500125-8500471 | LNCaP | SE_42166 | chr1:8498911-8499835 | Lung | SE_48103 | chr1:8498317-8498850 | Psoas_Muscle | SE_48103 | chr1:8498931-8499864 | Psoas_Muscle | SE_48600 | chr1:8498898-8499546 | Right_Atrium | SE_51176 | chr1:8497978-8500178 | Skeletal_Muscle | SE_53408 | chr1:8499004-8499850 | Spleen | SE_54752 | chr1:8497250-8500103 | Stomach_Smooth_Muscle | SE_58576 | chr1:8455425-8501956 | Ly1 | SE_60225 | chr1:8480836-8499894 | Ly4 | SE_60758 | chr1:8454848-8500160 | DHL6 | SE_62661 | chr1:8450826-8509851 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I008437 | chr1 | 8497651 | 8500633 |
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Enhancer Sequence | CTGGCTCGGC CTCCCAAGTA GGTCAGACTA CAGGTATGTG TCAGTTACCA TGCCCAGCTA 60 ATTTTAAAAA TATTTTTTTG TAGAGACGGG GTTCTCACTA TGTTGCCCAG GCTTGGTCTT 120 GAACTCTTGA TTTCAAGCAA TCCTGCTGCC TCAGCCTCCC AAAGAGTTGG GATTATGGCA 180 TGAGCCACTG TGCCCAGCCA GATCTCACTC CTGTAGGAAA AAAATCAATA TAGGATAATT 240 TTCAGTTAAA AAGATGTATA TACATACGAA GAGGGAGACC TACTAAAACA TCTGTTACAA 300 CAGCATATAG TAAGGCAGAA TCTTTGCATT TTCAAAATGT TTTCATAAAC TTTATTTGTT 360 AGAGCAATTT CAGGTTCACA GCAAAACGGA ACAGAAGGTA TAGGGATTTC CCATATAGAT 420 GGGTCTCTGG ATTTTTCAGC TAATTTTGAA AAATAGGGAA AAGAGCAATC AGCATTTTGT 480 GCTCACTACA GTAAACCAGG AACACAGGCA TCAGGAGAGC TGGGCTCTGA TTCAAAGGCC 540 TGATTCTAGC AAGGCCTCAC AGTTTACTTC CGGCTAGCCA TGAACACTCT CTGCGCCTGA 600 GGTTTTCGTG GAAAGACAGC ATCACAAGTA CTCAAATGTA GCGTTTAAAA GTACTAACTT 660 TTAAAATGTT GAATGTTCCA GTAAAACAGT TAAAGAAAAA AAAAGGTAAT AATCCAACTA 720 AGTAAAAATA TTAACTTATA CATATCTGGA TAGATGATAA GCTCATTACA GGCCCTAATT 780 TTATTATTTA AAATGTTTAC AACAAAACTC TCTAATTGAT ATTCTCCCTC TCTCTCTCTT 840 TTTGCCTTGA TATGGTTTCT ATAAACTCTT GGTTTAAAAA AGAAAAAAGG TCCATTTCTG 900 AGGCTTGGGT TTACTGTACT TACAGTTCCA CCAGTAAATC GTCTCCCAGT CTGGGCTGGA 960 GAAGCGCTGG CCACGGTTTG ATTGCTCCAG CCCCAGGTTG CCAGGCAACC CACACAAGGG 1020 GGAAGTCTGA GAACCGCTGA CAGATAGCCA AGTGGCTGAA ACAACAGACT TCTCTCTGTC 1080 AAAAATGTGT TTGAGAGAGC CACTTGCCCA CCTCTGCTCT CTGCTAAACA CTACATGATT 1140 GTAAAATCAA AATCAAAAGG CCACTGTAAT AAAAACACAC TTCCTGCTCA ATTACTAATT 1200 GTTCTAAAGC TGTGGGGAGG CCCAGATCCT ACAGTGTATG GCAACAGAAA TGCGATACTG 1260 TAAATGAGAT AAAGCCAGCA GCATGCAAGA AACCTGATCT AAATGCATCT CCGTAGCTTC 1320 AAGTCAGGAG AGCTGGTGTG TGGAGGAATC AACTGCCTAA GAAAACACCA GGAAGAAAAT 1380 AATGAATGTC AAGATGTTAA AGAAACAAAC CAATCAATAA CTACGAAGCT AGAGGTCAAG 1440 ACTACTTAGT AATAAAACCA AGAACATTCT CCATTGTTTT GAAACACAAT CTGGAGGCAA 1500 TGAAAGTTTT CTCCCTCAGA TGGAAAGGAG GAGCAAGAAA GGTCAATGAC CCTTGGGAAC 1560 CACACCCCCT GGCGGTTCCA GGTGGATTCC CTGATACTTG ACTGTAAATG GGATTACAGG 1620 AAATAGTAGC ATCCTTAGGA TAATGCAGGA CAATAACAGG TCTGAGAGTC TAATGCAACA 1680 TTTAAAATAC CTATGGTGTG AGCTGGGCAC AGTGGCTCAC GCCTGTAATC CCAGCACTTT 1740 GGGAGGCCGA GGTGGGTGGA TCACCTGAGG TCAAAAGTTT GAGACCAGCC TGGCCAACAC 1800 AGTGAAACCC CGTCTACACT AAAAATACAA AAAATTAGCT GGGCATGGTG GCAAACGCCT 1860 GTAATCCCAG CTACTGGGGA GGCTGAGGCA GGAGAATTGC TTCAACCCGG GAGGCAGAGG 1920 TTGCAGTGAG CTGAGATCGC GCCATTACAC TCCAGCCTGG GCAACAAGAG TGAAACTCCC 1980 TCTCAAACAA ACAAAAACAA AATATCTATG GTGCATGTAC CAAGCCAGTA ACATTGTGCC 2040 CAACACCAAC TCTATGCAGC ATCCTTCCAT GAAACCACTG TATTGAAACT GTCATCTTGG 2100 ACTCTGGAAA CTATTTGTAG TATGTGGAAG GGGCCAGCAC TGAGTGCACA GTTCTTTATC 2160 TCTTCTGTGC CATGGACCCT TTGGCAGTCT GGTAAAGCCT GACTCCTTCT AAAAATGGTT 2220 TATGGCCAGG CACGGCTCAT GCCTGTAATC CTAGCACTTT GGGAGGCCGA GGCAGGCGGA 2280 CATGAGGTTA 2290
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