| Tag | Content |
|---|
EnhancerAtlas ID | HS177-01709 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:201458130-201458930 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr1:201458592-201458612 | GTGAGGGGGGTGTGGTGGGG | - | 6.5 |
|
| | Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
| SE_00341 | chr1:201458403-201459656 | Adipose_Nuclei | | SE_01720 | chr1:201456566-201460394 | Aorta | | SE_03288 | chr1:201457673-201458706 | Brain_Angular_Gyrus | | SE_04052 | chr1:201457825-201458871 | Brain_Anterior_Caudate | | SE_04842 | chr1:201448443-201471134 | Brain_Cingulate_Gyrus | | SE_05817 | chr1:201447914-201479638 | Brain_Hippocampus_Middle | | SE_06742 | chr1:201448865-201477808 | Brain_Hippocampus_Middle_150 | | SE_07798 | chr1:201448554-201479644 | Brain_Inferior_Temporal_Lobe | | SE_25848 | chr1:201456379-201459279 | Duodenum_Smooth_Muscle | | SE_26585 | chr1:201456552-201460495 | Esophagus | | SE_32167 | chr1:201457699-201458392 | Gastric | | SE_32167 | chr1:201458421-201459026 | Gastric | | SE_34202 | chr1:201458524-201459614 | HCC1954 | | SE_34751 | chr1:201456558-201463441 | HeLa | | SE_35910 | chr1:201457923-201459502 | HMEC | | SE_38401 | chr1:201457529-201466376 | HUVEC | | SE_42560 | chr1:201457647-201460167 | Lung | | SE_45227 | chr1:201458582-201459164 | NHLF | | SE_45671 | chr1:201456478-201462527 | Osteoblasts | | SE_47011 | chr1:201457932-201458442 | Ovary | | SE_50506 | chr1:201457531-201460516 | Sigmoid_Colon | | SE_52849 | chr1:201457835-201460406 | Small_Intestine | | SE_54460 | chr1:201457731-201460272 | Spleen | | SE_54518 | chr1:201448446-201479292 | Stomach_Smooth_Muscle | | SE_55901 | chr1:201457225-201460094 | u87 | | SE_65522 | chr1:201457647-201459072 | Pancreatic_islets | | SE_67648 | chr1:201457225-201460094 | u87 |
|
Enhancer Sequence | GGGGTGAGGT GACTTACACT GTAAGTACAG GTGGGGCTGG CACTGAGAGG GCATGACCCT 60
ACCTTCATCT CATGCCAGAG CAGCGCGCAA TTCTCTCTGC CAAAGTCACA AAGGCTAGGG 120
CCTCTAGGGT CATCTCCCAT TTTACAGATG GACAAACCAA GCCTCAGCAC AATGTTATTT 180
CCATTGTAAC ATCATACTTC CCTCGGTCAC CCAGTTAACC CCAGAATCAT TTAACACCCC 240
ATTTGCTAAG AATTGCCCTC CTCTGCCCCT CATTCCTGCA GCTGGTCTAT TATCAGATTC 300
TTTACAGGAG AAATCTGCTG ATGAATCATT CCCACTGGGG CAATGACCTT GGCTGAAACT 360
TGGTAATTCA TCCATCATTT CCGTCCACCC CCCAGGCCGA GGAGCAAGCC AGGCTGACTG 420
CCAACAGCCA CCATTTACCC AGAGGCCAGG GAGTGCCGTG GGGTGAGGGG GGTGTGGTGG 480
GGCTGATGAC ACCCTATGGC ATTTCGAAGA AAGGGAAATG ACTTCTTCTC AGTAGTGAGA 540
GATAGCAGGG CTGAGACAGT GAGGCTGGTG TGGCAACGGT GCTGCCCTGA GCCCCTGATC 600
TGGCTCCGAC ACTCACTAGC CGTGGGACCC CAGGCAAGTC ACTGAGCCTG GGCTGGATTT 660
TCTCATCTAT AAAAAGAGGA GGCAACATGG TGAAACCCTG TCTCTACAAA ATACAGAATT 720
AGCTGGGTGT GGTGGCACAT GCCTGTACTC CCAGCTACTC GGGAGCCTGA GGCAAGAGGA 780
TCACTTGAGC CCAAGAAGCA 800
|
