| Tag | Content |
|---|
EnhancerAtlas ID | HS177-01271 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:143992640-143993180 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:143992849-143992870 | ATGAGGAAAGTGAAACTCAGA | - | 6.44 | | IRF2 | MA0051.1 | chr1:143992853-143992871 | GGAAAGTGAAACTCAGAG | + | 6.24 | | Mafb | MA0117.2 | chr1:143992994-143993006 | TGTCAGCATTTT | - | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03284 | chr1:143992144-143993814 | Brain_Angular_Gyrus | | SE_03937 | chr1:143988807-143994041 | Brain_Anterior_Caudate | | SE_05248 | chr1:143988738-143994157 | Brain_Cingulate_Gyrus | | SE_06288 | chr1:143988677-143994186 | Brain_Hippocampus_Middle | | SE_07109 | chr1:143988755-143994121 | Brain_Hippocampus_Middle_150 | | SE_08886 | chr1:143992546-143993564 | Brain_Mid_Frontal_Lobe | | SE_09271 | chr1:143979006-144016984 | CD14 | | SE_36217 | chr1:143989934-143994076 | HMEC | | SE_36936 | chr1:143990303-143994482 | HSMMtube |
|
| | Number: 3 | ID | Chromosome | Start | End |
| GH01I145015 | chr1 | 143988901 | 143993897 | | GH01I206279 | chr1 | 143989719 | 143993929 | | GH01I121261 | chr1 | 143990398 | 143993806 |
|
Enhancer Sequence | TGTGAAATGA TCAGGCAGCT TGATAACTTT AGACATACTG TACGTTATGA AGCATTTTCT 60
TGCTTCTTGT TGTCTTTTTC TGGTGGATTG AGTCAATGCA GTTGGTAGAA TCTTTTCCAC 120
TTATGTTATT GAGGCATGTG GTTGAAAAGT GGCCTTTAAA TGGTGTGAGG TGGGTAGGCA 180
GGGGATAAAT TCTTACCACA GTTTCTAGGA TGAGGAAAGT GAAACTCAGA GGCCCAAATC 240
TTCTGACTCA CACAGTGATT CTGGGGCTGT CTGTAATATC TAAACGATGA GACTGATCTA 300
CTTGCAAGGT CAGGGCATGT GGTCATTTTC TTGCTAGCCT TTGGATCACC AGGCTGTCAG 360
CATTTTGAGG GGGAGTATTT GCATCTTGCT TTATTTGGAA GATTCAGCTT GAGGGAGTCA 420
TTATTAGAAG ATTCTTAGAA CACTTGAGCC CTCTGAAAAT GAAAAGTCTC ACATTTCCCT 480
TCTACTTTGG CTCTCTGTTG GAGGGGAACA CTTATGTCAT TAAAAACATT GTACTTTGCT 540
|
