EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00541

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:45125970-45126300

Target genes

Number: 6
Name	Ensembl ID

TMEM53	ENSG00000126106
C1orf228	ENSG00000198520
RNU5F	ENSG00000199377
RP4	ENSG00000259794
RNU5D	ENSG00000200169
KIF2C	ENSG00000142945

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_03549	chr1:45125729-45126381	Brain_Angular_Gyrus
SE_04765	chr1:45123495-45126845	Brain_Cingulate_Gyrus
SE_05770	chr1:45123509-45128904	Brain_Hippocampus_Middle
SE_06677	chr1:45124442-45126703	Brain_Hippocampus_Middle_150
SE_07718	chr1:45124480-45126301	Brain_Inferior_Temporal_Lobe

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I044660

chr1

45125921

45126130

Enhancer Sequence

AAACACAGAT GTGGACTGTC AACACCAGAG CTGGGGTGGG GGCGGGGGTG ACTGCCCAAT 60
CCAGAGTCAG CAGCACTCCG GCTGCTGCAG GCAGGGAACA ACGGGTGCCA GGCCCAGGCA 120
TCCTGCCAGC ACGCATGCAC CAGTTCCCAC CCCGTGCTGC TCCAGCTGCC TTTCTGCAGG 180
AGGCACCATG GGGTCACCGG ACAAACCAAC ACAAGGGCAC CTTTCTTTAG AGACTCGAAG 240
ACAGCCCAAG TGAGGAAAGT AAATACCTTG TCCACGCCCT TTCCTCTTCT GATCCAGGGC 300
TCAGCGAACT ACAACCCCGG GGCCAAACTG 330