EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00354

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:28052670-28053140

Target genes

Number: 19
Name	Ensembl ID

RP11	ENSG00000243659
TMEM222	ENSG00000186501
U6	ENSG00000206888
MAP3K6	ENSG00000142733
GPR3	ENSG00000181773
AHDC1	ENSG00000126705
FGR	ENSG00000000938
RP1	ENSG00000235912
IFI6	ENSG00000126709
CHMP1AP1	ENSG00000226662
FAM76A	ENSG00000009780
RP3	ENSG00000231344
AL020997.1	ENSG00000239859
STX12	ENSG00000117758
PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
XKR8	ENSG00000158156

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4

MA0039.3

chr1:28052766-28052777

GCAGGGTGTGG

6.62

Enhancer Sequence

AGGTGCGCGG GCTGGGGCGG CGGCCGGGAA CTGGGGACGC AGGAGGCGCG GCCCGGAGCT 60
CCAGATTCTG TGGGGACGCC CGGCGGGGTC CCCGGAGCAG GGTGTGGCAG GCCCGCCAGG 120
CTGAGGAGCC GCACCCACCC CGCTGGGGGC CGGCGGGGCA CGTGCGGGAG CCGGGACCCG 180
GTCCAGGCTC CCGCGGCCGG CGTGTCCGGG TGCTTAGCAA CCGTGGGGAT TGTTCTCGGA 240
CCCCGTGAGG TCGGGGGAGG GACAGCGGGT CCCCTGCTTG CCCTGACTGG TCGCCTTCGG 300
GATCCCTTTG CGCTGCCTCC CCCGCCGCCG CGGTCTCCCT GGTGGGGACC TCCTGCCCCT 360
CCTGGGACTG AACTCCAAAG TTGGGTGCTG CCTTGGAGGA ATGTGTCGAA CTCGGGCTCC 420
TCACGGGCAC TTTTCGACCA GTTTCAGAAT CGGAGGTAGC AAGGCTTGAT 470