| Tag | Content |
|---|
EnhancerAtlas ID | HS177-00349 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:27863000-27863730 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr1:27863216-27863236 | TCTGTTGGGGTGTTGGGGGT | - | 6.27 | | ZNF263 | MA0528.1 | chr1:27863610-27863631 | GAAGGAGCGGGGGAGGGGGGA | + | 7.62 |
|
| | Number of super-enhancer constituents: 34 | ID | Coordinate | Tissue/cell |
| SE_00527 | chr1:27863080-27864417 | Adipose_Nuclei | | SE_00861 | chr1:27861963-27864577 | Adrenal_Gland | | SE_02913 | chr1:27863208-27864567 | Bladder | | SE_03261 | chr1:27861926-27863334 | Brain_Angular_Gyrus | | SE_03261 | chr1:27863441-27864677 | Brain_Angular_Gyrus | | SE_03939 | chr1:27861637-27864802 | Brain_Anterior_Caudate | | SE_05196 | chr1:27861563-27864856 | Brain_Cingulate_Gyrus | | SE_05814 | chr1:27860964-27864950 | Brain_Hippocampus_Middle | | SE_06945 | chr1:27861896-27864522 | Brain_Hippocampus_Middle_150 | | SE_07770 | chr1:27861456-27864855 | Brain_Inferior_Temporal_Lobe | | SE_08936 | chr1:27862641-27863189 | Brain_Mid_Frontal_Lobe | | SE_24033 | chr1:27861928-27863079 | Colon_Crypt_2 | | SE_24711 | chr1:27861126-27863081 | Colon_Crypt_3 | | SE_24711 | chr1:27863158-27863647 | Colon_Crypt_3 | | SE_26518 | chr1:27861036-27866124 | Esophagus | | SE_29557 | chr1:27862141-27864415 | Fetal_Muscle | | SE_31394 | chr1:27862188-27864568 | Gastric | | SE_34367 | chr1:27863121-27871533 | HCT-116 | | SE_34755 | chr1:27863350-27872122 | HeLa | | SE_35950 | chr1:27861343-27868167 | HMEC | | SE_36974 | chr1:27861328-27874193 | HSMMtube | | SE_40593 | chr1:27861294-27866055 | Left_Ventricle | | SE_42106 | chr1:27861870-27865995 | Lung | | SE_46630 | chr1:27862394-27863156 | Ovary | | SE_46630 | chr1:27863205-27864420 | Ovary | | SE_48058 | chr1:27861994-27865651 | Psoas_Muscle | | SE_48567 | chr1:27861805-27864738 | Right_Atrium | | SE_49444 | chr1:27862439-27864550 | Right_Ventricle | | SE_51091 | chr1:27861963-27867840 | Skeletal_Muscle | | SE_51984 | chr1:27863440-27868100 | Skeletal_Muscle_Myoblast | | SE_54527 | chr1:27861731-27864664 | Stomach_Smooth_Muscle | | SE_63746 | chr1:27863403-27868144 | HSMM | | SE_65253 | chr1:27861089-27864850 | Pancreatic_islets | | SE_68682 | chr1:27862389-27864424 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027535 | chr1 | 27861549 | 27873565 |
|
Enhancer Sequence | ATAGGTAGAA AAGCAGCTCT TGGGGCAAGG GCTGCTGCTG GGATGAATGC AAGCTCTCCA 60
CAGTCAGGCG GTAAACAGGC TGCAGAGACA AGAGGGGTGT CTATTAGGGA GCAGAATGAT 120
TTTATCTGGG GTAACTGCTT GAGCCAGAGC GCTGGGGGCA TCTATCCAGA GGACTGCTCT 180
ATTGCGGTTG AAGAACAGTT GCCAAGCTAA AGAACCTCTG TTGGGGTGTT GGGGGTGACA 240
AGGGAAGGGG ACTTTAGGAT GGGCTGCTCC AAACCACTGG CAAACTGATA TTGTCCAACG 300
CCAGCCTCCC CTGCTCCCTC CAAGGGCCCC GGGGCAGGCT GGGAGCCTCT GCACAAATCC 360
CTGCACCCCC ACCCCCACCC CAGGCCCTTA GCCACTGCCA GTGACCCTCT CTAAGCCAGG 420
TCTCCATGGT GATCTCAGCC CAGCAGGCGG CTCCTGCCAG AACCATTCCC GCGGTGCCTG 480
CGGCCAGGCA GCAGGAGGCT TTCTCACCCT CTGCTAAGCC GCCCATCGCG TCTCACCTTC 540
CTCCTCCCAC TACCCTCCCC AGCTTTCAGG ACTTGGCCAG CCAGAGACTT TGGCAGAATC 600
TTCGGGATGG GAAGGAGCGG GGGAGGGGGG AAATCAAAGC CCAAAAGCCC CAGGGTTCTC 660
TCATGGAGGT GGGGGAGAAT GCTGTGGCTG TGTGGAACCC TGACCTCACC AGGTTCAGCT 720
CTCCACAAAG 730
|
