| Tag | Content |
|---|
EnhancerAtlas ID | HS177-00142 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:12493060-12494640 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr1:12493624-12493641 | GGGTCATTCCAAGTTCA | + | 6.12 | | RUNX1 | MA0002.2 | chr1:12494493-12494504 | CTCTGTGGTTT | + | 6.14 | | ZNF263 | MA0528.1 | chr1:12494025-12494046 | GGAGGAGGAGGAGGAGGAAAG | + | 10.19 | | ZNF263 | MA0528.1 | chr1:12493951-12493972 | AGAGGAGGAGGTAGGGGGTGG | + | 6.36 | | ZNF263 | MA0528.1 | chr1:12493954-12493975 | GGAGGAGGTAGGGGGTGGGGA | + | 7.37 | | ZNF263 | MA0528.1 | chr1:12494028-12494049 | GGAGGAGGAGGAGGAAAGAAG | + | 8.13 | | ZNF263 | MA0528.1 | chr1:12494022-12494043 | TGTGGAGGAGGAGGAGGAGGA | + | 8.15 |
|
| | Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
| SE_00009 | chr1:12492605-12496972 | Adipose_Nuclei | | SE_01743 | chr1:12492493-12494609 | Aorta | | SE_03005 | chr1:12493307-12494046 | Bladder | | SE_03005 | chr1:12494394-12494761 | Bladder | | SE_15065 | chr1:12492619-12497585 | CD4_Memory_Primary_7pool | | SE_20910 | chr1:12492967-12497444 | CD8_Memory_7pool | | SE_26086 | chr1:12493139-12494968 | Duodenum_Smooth_Muscle | | SE_26716 | chr1:12492824-12494882 | Esophagus | | SE_29231 | chr1:12492824-12495344 | Fetal_Intestine_Large | | SE_29871 | chr1:12492943-12496653 | Fetal_Muscle | | SE_33776 | chr1:12492745-12496835 | HCC1954 | | SE_37319 | chr1:12492732-12495649 | HSMMtube | | SE_39882 | chr1:12492813-12499393 | K562 | | SE_41209 | chr1:12492560-12495038 | Left_Ventricle | | SE_42647 | chr1:12492609-12494807 | Lung | | SE_45864 | chr1:12493103-12496844 | Osteoblasts | | SE_49026 | chr1:12492458-12494788 | Right_Atrium | | SE_50544 | chr1:12492877-12494722 | Sigmoid_Colon | | SE_51539 | chr1:12492828-12494951 | Skeletal_Muscle | | SE_52815 | chr1:12492745-12494814 | Small_Intestine | | SE_54847 | chr1:12492782-12495035 | Stomach_Smooth_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I012432 | chr1 | 12492844 | 12500570 |
|
Enhancer Sequence | CTTAGTACCT TAGTACCTTT TCTCTCCTGG TAACTTAGAA TGGAAGCCCC ATGGGGGCCC 60
ACGCATATCT GCGAGGGTGC ACAGGCATGT GGCAGAATGA GCCAGGGGCC ACCCTCTTGT 120
TCTGGAGGTG CTGAGAGCCG GCCTGGCTGG GGGCTGTAAC TGTCAGGCTG ACTCCCAGCC 180
ACACTGTCCT CCCTGGAGTA GGTGCTCGAA ACCTTTGCTT TTTGCCTTTT CGCTTTAATC 240
TGGAACGCTT GGGGAAAAAA AAAAAACAAA AAAACAAAAA AACAACAACA AAACAGTAGA 300
CCAAATGGTG ACTGAGTCCC AACCCTTCTT CAGGCCAGAT GAAATCATGG TCCCTGCTGG 360
CGCCATTCCT CCATCTCAGA GCCCTCACTT GGGTTCAGAC CCTCAGTCAC ACAGGGAGCC 420
CCGCCACAGC TGAAGTGTTT TGTCAGAGCA AGATTGCAAA GAGTTAACAC TTTTGCTTTT 480
TCGGAAAGTT ATCTGTGAAG AGTATTAGTT GTTTAATAAA GCGTGCCTGC CCTCCCGATG 540
AACCCGCCAG TGACTCTGCA GCTGGGGTCA TTCCAAGTTC ACGCAGTGGA CTTTTGACTG 600
CCTTCTGTGT CTGTGAAAAC AGTCGGCAGC TCCTGCGGGG ATCATTCATT CAGGCCTGTA 660
ACACAAAACT ATTGCCAATG GGCACCTGCT GGGGCAGCTT CCCGGGAGGG CTGGGAGGAA 720
GATACCAAAC TCATCAGGCA TCTGTGGAGA TAAGAGCGGC AGGGGATCCA CTGGGATCCC 780
GCTAATCAGG CCTGCACTTA GACCCCACTG CCTGGCCAAC AGGCTGGTGT CAGAATGTAT 840
TAGGCAGCCC TGGCCAGGAT AGGATGTGAG CTAATTAAAG GCCTTTTACA AAGAGGAGGA 900
GGTAGGGGGT GGGGAGAGAG AGAGAGTGAG AGAGAGAGAG AGAGAGTGTG TGTGTGTGTG 960
TGTGTGGAGG AGGAGGAGGA GGAAAGAAGT TTGAAGTGCA TTCCCCAAAT TTCCAGCACA 1020
TTCTTTATTC CTCTGTTTTA TCCCTCAAAA CAGAAGAAAA CAAATTAGAG GCTGAGCATT 1080
TGGTTATTTC TAACCTGAAA TTGTCATTCA TTGTGCCTGA TGCCGTATTG GTTTTAACTG 1140
CTATTTTTGT GGAATTACAT ATACTGTGAA AGACATCTTT TGCCGCAGTC TCCCTGGGAA 1200
CATCCTGTTG TTGAAATGCC GTTGGTCAGC TGCTTGAATT TTGCCCTTTT CTCTGACTTT 1260
GACACATCAA GGCAAAAATA GGTACCTATT TGTGGTGTGT TCTAGGTTTC TCCCTTTTGC 1320
TTGGAAAATC CACTTGCCAG CTGTGAAGGG TGCTGCTGGG AGGATGAAAT GAGTCAGTGC 1380
ACAGCGTGTG CTCTTAAAGT TTGGTGGTTG AGGTGGCGGT GGTAGCAGCT TGGCTCTGTG 1440
GTTTAAAATG CCACAGCATG CACTATCTTG AAAATACTCA GTAGTCCTAG CATACAACTG 1500
GGTTTTAGTT ACACCTACTT AAGGAAGAAA GCTCATTTGA AAGTGTTTGA TTTTCCTGTA 1560
CTTTCGTTTG TTTATTTAGC 1580
|
