EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00078

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:8100530-8101060

Target genes

Number: 8
Name	Ensembl ID

PER3	ENSG00000049246
RP3	ENSG00000236266
UTS2	ENSG00000049247
TNFRSF9	ENSG00000049249
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
RP11	ENSG00000238290
CTA	ENSG00000232848

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_01874	chr1:8099666-8101052	Aorta
SE_26425	chr1:8099767-8101609	Duodenum_Smooth_Muscle
SE_33765	chr1:8099879-8101573	HCC1954
SE_34231	chr1:8099554-8102426	HCT-116
SE_34846	chr1:8099891-8101213	HeLa
SE_36931	chr1:8099699-8101977	HSMMtube
SE_45858	chr1:8099933-8101698	Osteoblasts
SE_47106	chr1:8099395-8101831	Panc1
SE_51696	chr1:8100193-8101440	Skeletal_Muscle_Myoblast
SE_52775	chr1:8100403-8100987	Small_Intestine
SE_54897	chr1:8099700-8101657	Stomach_Smooth_Muscle
SE_55872	chr1:8098984-8102769	u87
SE_63484	chr1:8100182-8101259	HSMM
SE_67534	chr1:8098984-8102769	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008039

chr1

8099908

8101624

Enhancer Sequence

CTTCTTGGCA AGCAGTCTTT GAGATGGAGA TGAACATGGA GGACATTTAT TAGAGTGTTG 60
AAGGAAGGGT GAGGAAAAAG AATTGGGCAG AGGGAGAAGT TAAGTTGTGA TCCATGTACG 120
ACATAGGCCT TAGCTAACTA CATGCAAAGC TCTGGAACAG GATTGACCCT TTGGAGTTGT 180
CCTAACTTGG GCAAGAGAGC TGGACCTTTT TTCCTCTAAC TCTTATTGGT CAGTCATTGA 240
TATGGCTTGC CTTTGGAAGG AAGAGTAAGC TTGGAAAAGG CAGTTTTCTT CAGCTGAGTC 300
ACTCTCCAAA CAGGGTTGAC AGCTAAGGGC CATGTTCTGG CAGCATTCCC AGGAGCTTGA 360
GGAATAAGGC TTTTCATAAC TCATTGGGGA TCTGGGTAGC TCATCATGGA AACTTCCTTT 420
TGTTCTCTCT GTTGTTAGTT TATCCTTCCT CACTCCATTT TCCTAGTAGT TTTGTTGATG 480
TTTCTACTTT GATATTTTGA GGCTATATTA TTCAGAGCAT ACATGTTTAG 530