EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00024

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:2518390-2518520

Target genes

Number: 14
Name	Ensembl ID

RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PLCH2	ENSG00000149527
RP3	ENSG00000224387
TNFRSF14	ENSG00000157873
FAM213B	ENSG00000157870
RP13	ENSG00000237058
MMEL1	ENSG00000142606

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_10382	chr1:2514709-2518511	CD19_Primary
SE_11079	chr1:2505559-2519033	CD20
SE_12088	chr1:2514901-2518455	CD3
SE_16962	chr1:2514673-2519181	CD4p_CD225int_CD127p_Tmem
SE_17520	chr1:2514527-2519648	CD4p_CD25-_CD45RAp_Naive
SE_17944	chr1:2514368-2519655	CD4p_CD25-_CD45ROp_Memory
SE_19528	chr1:2514585-2519366	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20377	chr1:2515112-2518729	CD56
SE_22594	chr1:2514546-2519072	CD8_primiary
SE_31841	chr1:2515975-2519175	Gastric
SE_52783	chr1:2514829-2519610	Small_Intestine
SE_54330	chr1:2514718-2519362	Spleen
SE_55522	chr1:2515866-2518497	Thymus

Enhancer Sequence

AGGCCGGGTG GACGCAGGGC GGTGGGCGCG TCCCTGGCTC CTTGCCCGGG CGTCCTGGCA 60
GCGATGGGGT GGTGGGGGCC GCGGGGCCTG GGCGGGGCTG GGGGCAACGG GGCGCGCCCA 120
TGACCCAGCC 130